Q8T0B2 (Q8T0B2_DROME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
LD14125p EMBL AAL39579.1

Gene names

Name:	nito FlyBase FBgn0027548
Synonyms:	BcDNA:GH11110 EMBL AAL39579.1
ORF Names:	CG2910 FlyBase FBgn0027548

Organism

Drosophila melanogaster (Fruit fly) EMBL AAL39579.1

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	589 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological process	nuclear mRNA splicing, via spliceosome Inferred by curator. Source: FlyBase regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular component	precatalytic spliceosome Inferred from direct assay. Source: FlyBase
Molecular function	nucleic acid binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8T0B2 [UniParc]. Last modified June 1, 2002. Version 1. Checksum: 1849410297861BD1	FASTA	589	65,695
	10 20 30 40 50 60 MGQGVPLDHR RPPIDPYDRY GPPHMHPHAV HPRDYRPLHH DYPHPPRGPP LHRGGHPHHL 70 80 90 100 110 120 HGHAPPHQYA PMRPLAPRPH APYEKPESKK DKFPNYLHHV QPEDDPLSTR TLFAGNLEVT 130 140 150 160 170 180 IADDELRRIF GKYGVVDDID IKRPPPGTGN AFAFVRYQNL DMAHRAKIEL SGQYIGKFQC 190 200 210 220 230 240 KIGYGKVTPA TRMWIGGLGA WTSVTQLERE FDRFGAIKKI EYQKGEPYAY IQYETVEAAT 250 260 270 280 290 300 AAVKEMRGFP LGGPERRLRT DFAELPGATP AAPFKSSKPP YDESALEYRR PEYDPYYEES 310 320 330 340 350 360 AAYAPRGGYS PYPPRGGYRG RGGYRGRGRG MYHYHNDVHR PPHPGSLAGS SSSVPPPGGV 370 380 390 400 410 420 EDEWRRPPGE SYDRGARSSS REPGVERSRS RSPLKRARSP GSDSDTSTRR NDALASASTV 430 440 450 460 470 480 PDVARKCSTV WTGALILKSS LFPAKFHLTD GDTDIVESLM RDEEGKHNLR ITQRLRLDPP 490 500 510 520 530 540 KLDDVQKRIA SSSSHAIFMG LAGSTNDTNC DDASVQTRPL RNLVSYLKQK EAAGVISLLN 550 560 570 580 KETEATGVLY AFPPCDFSTE LLKRTCHSLT EEGLKEDHLV IVVVRGGTA

References

[1]

Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J. , Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S. Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley EMBL AAL39579.1.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY069434 mRNA. Translation: AAL39579.1.
3D structure databases
HSSP	HSSP built from PDB template 3SXL based on UniProtKB P19339.
ProteinModelPortal	Q8T0B2.
SMR	Q8T0B2. Positions 181-264.
ModBase	Search...
Protein-protein interaction databases
STRING	Q8T0B2.
Proteomic databases
PRIDE	Q8T0B2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
FlyBase	FBgn0027548. nito.
Phylogenomic databases
eggNOG	inNOG04227.
GeneTree	EMGT00050000001319.
InParanoid	Q8T0B2.
Gene expression databases
ArrayExpress	Q8T0B2.
Bgee	Q8T0B2.
Family and domain databases
InterPro	IPR012677. Nucleotide-bd_a/b_plait. IPR000504. RRM_dom. IPR016194. SPOC-like. IPR012921. SPOC_C. IPR010912. SPOC_met. [Graphical view]
Gene3D	G3DSA:3.30.70.330. a_b_plait_nuc_bd. 2 hits. G3DSA:2.40.290.10. G3DSA:2.40.290.10. 1 hit.
Pfam	PF00076. RRM_1. 2 hits. PF07744. SPOC. 1 hit. [Graphical view]
SMART	SM00360. RRM. 2 hits. [Graphical view]
SUPFAM	SSF100939. SPOC-like. 1 hit.
PROSITE	PS50102. RRM. 2 hits. PS50917. SPOC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8T0B2_DROME

Accession

Primary (citable) accession number: Q8T0B2

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2002
Last sequence update:	June 1, 2002
Last modified:	November 16, 2011
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)