Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q8SYM9 (Q8SYM9_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 86. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length415 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q8SYM9 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: A187316EA49A81D5

FASTA41543,968
        10         20         30         40         50         60 
MPAKRMTVTT AAASTISGAS GSTTNNGQSG GGARPLETLN GMTRLTPARD LTLGGRGAGT 

        70         80         90        100        110        120 
ASKKVFAPNL NAVRNKNANV KTSKDTTQPR SGRRGGRGNG TGATRGRGGN SAGGGNSTLI 

       130        140        150        160        170        180 
QTQGLFSEGA GDVHVRRSTG NGTAYARGGE EVSVTRKRVD RKDDKSQAER IKELLGESDA 

       190        200        210        220        230        240 
SGGELSEEEA NKTEMALRPI LLKEGLWVTQ KTPIAKQEIA SSTSTLKDTL AVAQHLQQLH 

       250        260        270        280        290        300 
VAAQAASLEE PPLQYGRYPR TIGNFLDSSE AQIFLMQLPD VLPCVGDDSE DPEPSKGDHQ 

       310        320        330        340        350        360 
ATSESEPASP ADKCSNGPKG SVLRQLEEGQ IGKILRYKSG RVKLQLGDTR FDLDMGLDPG 

       370        380        390        400        410 
FLQELMSVTA NREQRSGNMI NLGPIQAKLK ATPDWVHLFQ QQDAASKRTN PVPGT

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A. expand/collapse author list , Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAL49058.1.
[3]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: Berkeley.
[4]Carlson J., Booth B., Frise E., Park S., Wan K., Yu C., Celniker S.
Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014296 Genomic DNA. Translation: AAF49278.2.
AY071436 mRNA. Translation: AAL49058.1.
BT044572 mRNA. Translation: ACI16534.1.
RefSeqNP_649028.3. NM_140771.3.
UniGeneDm.991.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ8SYM9. 2 interactions.
MINTMINT-1582164.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0075136; FBpp0074902; FBgn0036775.
GeneID40002.
KEGGdme:Dmel_CG5147.
UCSCCG5147-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0036775. CG5147.

Phylogenomic databases

eggNOGNOG239914.
GeneTreeENSGT00390000013948.
InParanoidQ8SYM9.
KOK03026.
OMANAVRNKN.
OrthoDBEOG4JWSWS.

Family and domain databases

InterProIPR007811. RNA_pol_III_Rpc4.
[Graphical view]
PANTHERPTHR13408. PTHR13408. 1 hit.
PfamPF05132. RNA_pol_Rpc4. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi40002.
NextBio816505.

Entry information

Entry nameQ8SYM9_DROME
AccessionPrimary (citable) accession number: Q8SYM9
Secondary accession number(s): Q9VVN3
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: May 1, 2013
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info