Q8SXI7 (Q8SXI7_DROME) Unreviewed, UniProtKB/TrEMBL
Last modified
November 16, 2011.
Version 51.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: RE28792p EMBL AAL90352.1 | ||||
| Gene names |
| ||||
| Organism | Drosophila melanogaster (Fruit fly) | ||||
| Taxonomic identifier | 7227 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora |
Protein attributes
| Sequence length | 417 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Sequence similarities | Contains 1 KH domain. RuleBase RU003302 |
Ontologies
| Keywords | |
|---|---|
| Domain | Zinc-finger RuleBase RU004486 |
| Ligand | Metal-binding Zinc |
| Gene Ontology (GO) | |
| Biological process | inter-male aggressive behavior Inferred from mutant phenotype. Source: FlyBase nuclear mRNA splicing, via spliceosomeInferred by curator. Source: FlyBase |
| Cellular component | precatalytic spliceosome Inferred from direct assay. Source: FlyBase |
| Molecular function | RNA binding Inferred from electronic annotation. Source: InterPro zinc ion bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
| ||||||||||||||||||
References
| [1] | Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J., Park S., Wan K., Yu C., Rubin G.M., Celniker S. Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley EMBL AAL90352.1. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AY089614 mRNA. Translation: AAL90352.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1K1G based on UniProtKB Q9BW01. |
| ProteinModelPortal | Q8SXI7. |
| SMR | Q8SXI7. Positions 19-140, 145-188. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q8SXI7. |
Proteomic databases | |
| PRIDE | Q8SXI7. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Organism-specific databases | |
| FlyBase | FBgn0025571. SF1. |
Phylogenomic databases | |
| eggNOG | inNOG06660. |
| InParanoid | Q8SXI7. |
| OrthoDB | EOG4M906T. |
Gene expression databases | |
| ArrayExpress | Q8SXI7. |
| Bgee | Q8SXI7. |
Family and domain databases | |
| InterPro | IPR004087. KH. IPR004088. KH_type_1. IPR018111. KH_type_1_subgr. IPR013084. Znf_CCH_retrovir. IPR001878. Znf_CCHC. [Graphical view] |
| Gene3D | G3DSA:4.10.60.10. Znf_CCH_retrovir. 1 hit. |
| Pfam | PF00013. KH_1. 1 hit. [Graphical view] |
| SMART | SM00322. KH. 1 hit. SM00343. ZnF_C2HC. 2 hits. [Graphical view] |
| PROSITE | PS50084. KH_TYPE_1. 1 hit. PS50158. ZF_CCHC. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q8SXI7_DROME | ||||||||
| Accession | Primary (citable) accession number: Q8SXI7 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with