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Unreviewed, UniProtKB/TrEMBL Q8SXI7 (Q8SXI7_DROME)

Last modified June 16, 2009. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    RE28792p EMBL AAL90352.1
Gene names
Name: SF1 FlyBase FBgn0025571
ORF Names: CG5836 FlyBase FBgn0025571
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome] EMBL AAL90352.1
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length417 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 KH domain. RuleBase RU003302V0

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentnucleus

Inferred from direct assay. Source: FlyBase

   Molecular functionRNA binding

Inferred from electronic annotation. Source: InterPro

zinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8SXI7-1 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: 1C98891EF5FF6954

FASTA41744,080
        10         20         30         40         50         60 
MQTVNPEFKP PADYKPPVTR VSDKVLIPQE QHPDINFVGL LIGPRGNTLK AMEKDTGAKI 

        70         80         90        100        110        120 
IIRGKGSVKE GKVGRKDGQP LPGEDEPLHA FITAPNPEAV RKAVDKIKDV IRQGIEVPEG 

       130        140        150        160        170        180 
HNDLRRMQLR ELAQLNGTLR ENDIQRCTCG STDHKSWQCP DKPIITNTIV CTSCGGNGHL 

       190        200        210        220        230        240 
TKDCRNKRPG SGVPGMACED SQAKIDEEYM SLMAELGEGP PPPSASAKTD PPASNGPQLH 

       250        260        270        280        290        300 
RASYSIFDKK PSQMQAIQSP PSSSSRDHQR DLGGWGAAAH EHGMGMEHGM GLDQHGHGLA 

       310        320        330        340        350        360 
AMDHGMSLGM EHAMAAYVPA PPGTQAPPPM PPPLMPWMSA PQPPPPATEP LNPPIPGTLP 

       370        380        390        400        410 
PLIPPPPGTS APPMPPWGGG AYSGWGGGYA PPPPPPCAPP PPALSLSQPP PPPPPSA 

« Hide

References

[1]Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J., Park S., Wan K., Yu C., Rubin G.M., Celniker S.
Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAL90352.1.

Cross-references

Sequence databases

AY089614 mRNA. Translation: AAL90352.1.

3D structure databases

HSSPHSSP built from PDB template 1K1G based on UniProtKB Q9BW01.
SMRQ8SXI7. Positions 19-140.
ModBaseSearch...

Proteomic databases

PRIDEQ8SXI7.

Genome annotation databases

EnsemblFBgn0025571. Drosophila melanogaster. [Contig view]

Organism-specific databases

FlyBaseFBgn0025571. SF1.

Gene expression databases

ArrayExpressQ8SXI7.

Family and domain databases

InterProIPR004087. KH.
IPR004088. KH_type_1.
IPR018111. KH_type_1_subgr.
IPR001878. Znf_CCHC.
[Graphical view]
PfamPF00013. KH_1. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTSM00322. KH. 1 hit.
SM00343. ZnF_C2HC. 2 hits.
[Graphical view]
PROSITEPS50084. KH_TYPE_1. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8SXI7_DROME
AccessionPrimary (citable) accession number: Q8SXI7
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: June 16, 2009
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information