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Protein
Submitted name:

TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1)

Gene

ECU04_1440

Organism
Encephalitozoon cuniculi (strain GB-M1) (Microsporidian parasite)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Initiation factorImported

Keywords - Biological processi

Protein biosynthesis

Names & Taxonomyi

Protein namesi
Submitted name:
TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1)Imported
Gene namesi
Ordered Locus Names:ECU04_1440Imported
OrganismiEncephalitozoon cuniculi (strain GB-M1) (Microsporidian parasite)Imported
Taxonomic identifieri284813 [NCBI]
Taxonomic lineageiEukaryotaFungiMicrosporidiaUnikaryonidaeEncephalitozoon
Proteomesi
  • UP000000819 Componenti: Chromosome IV

Organism-specific databases

EuPathDBiMicrosporidiaDB:ECU04_1440.

Interactioni

Protein-protein interaction databases

DIPiDIP-59167N.
STRINGi284813.NP_584829.1.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3EIKX-ray1.90A/B1-198[»]
3OC3X-ray3.10C/D1-198[»]
3OCIX-ray1.90A/B1-198[»]
4WZSX-ray3.78D2-198[»]
ProteinModelPortaliQ8ST28.
SMRiQ8ST28. Positions 19-197.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8ST28.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3302. Eukaryota.
COG2101. LUCA.
HOGENOMiHOG000105162.
InParanoidiQ8ST28.
KOiK03120.
OMAiTFSSYEP.
OrthoDBiEOG77T1GJ.

Family and domain databases

Gene3Di3.30.310.10. 2 hits.
HAMAPiMF_00408. TATA_bind_prot_arch.
InterProiIPR012295. Beta2_adaptin/TBP_C_dom.
IPR000814. TBP.
IPR030491. TBP_CS.
[Graphical view]
PANTHERiPTHR10126. PTHR10126. 1 hit.
PfamiPF00352. TBP. 2 hits.
[Graphical view]
PRINTSiPR00686. TIFACTORIID.
PROSITEiPS00351. TFIID. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8ST28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDAPDISYEH QETSVPNRSG IIPTLQNVVA TVNLSCKLDL KNIALRARNA
60 70 80 90 100
EYNPKRFAAV IMRIREPKTT ALIFASGKMV ITGAKSEKSS RMAAQRYAKI
110 120 130 140 150
IHKLGFNATF DDFKIQNIVS SCDIKFSIRL EGLAYAHSNY CSYEPELFPG
160 170 180 190
LIYRMVKPKI VLLIFVSGKI VLTGAKVRDD IYQAFNNIYP VLIQHRKA
Length:198
Mass (Da):22,299
Last modified:June 1, 2002 - v1
Checksum:i870170B56DDEC0EF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL590444 Genomic DNA. Translation: CAD25333.1.
RefSeqiNP_584829.1. NM_001041179.1.

Genome annotation databases

EnsemblFungiiCAD25333; CAD25333; CAD25333.
GeneIDi858977.
KEGGiecu:ECU04_1440.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL590444 Genomic DNA. Translation: CAD25333.1.
RefSeqiNP_584829.1. NM_001041179.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3EIKX-ray1.90A/B1-198[»]
3OC3X-ray3.10C/D1-198[»]
3OCIX-ray1.90A/B1-198[»]
4WZSX-ray3.78D2-198[»]
ProteinModelPortaliQ8ST28.
SMRiQ8ST28. Positions 19-197.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-59167N.
STRINGi284813.NP_584829.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiCAD25333; CAD25333; CAD25333.
GeneIDi858977.
KEGGiecu:ECU04_1440.

Organism-specific databases

EuPathDBiMicrosporidiaDB:ECU04_1440.

Phylogenomic databases

eggNOGiKOG3302. Eukaryota.
COG2101. LUCA.
HOGENOMiHOG000105162.
InParanoidiQ8ST28.
KOiK03120.
OMAiTFSSYEP.
OrthoDBiEOG77T1GJ.

Miscellaneous databases

EvolutionaryTraceiQ8ST28.

Family and domain databases

Gene3Di3.30.310.10. 2 hits.
HAMAPiMF_00408. TATA_bind_prot_arch.
InterProiIPR012295. Beta2_adaptin/TBP_C_dom.
IPR000814. TBP.
IPR030491. TBP_CS.
[Graphical view]
PANTHERiPTHR10126. PTHR10126. 1 hit.
PfamiPF00352. TBP. 2 hits.
[Graphical view]
PRINTSiPR00686. TIFACTORIID.
PROSITEiPS00351. TFIID. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GB-M1Imported.
  2. "structural studies of ecTBP."
    Cui S., Wollmann P., Moldt M., Hopfner K.-P.
    Submitted (SEP-2008) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS).
  3. "Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP."
    Wollmann P., Cui S., Viswanathan R., Berninghausen O., Wells M.N., Moldt M., Witte G., Butryn A., Wendler P., Beckmann R., Auble D.T., Hopfner K.P.
    Nature 475:403-407(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS).
  4. "Structural basis for recognition and remodeling of the TBP:DNA:NC2 complex by Mot1."
    Butryn A., Schuller J.M., Stoehr G., Runge-Wollmann P., Forster F., Auble D.T., Hopfner K.P.
    Elife 4:0-0(2015) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.78 ANGSTROMS) OF 2-198.

Entry informationi

Entry nameiQ8ST28_ENCCU
AccessioniPrimary (citable) accession number: Q8ST28
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: March 16, 2016
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.