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Q8SSE3 (Q8SSE3_ENCCU) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA ligase RuleBase RU000617
EC=6.5.1.1 RuleBase RU000617
Gene names
Ordered Locus Names:ECU02_1220 EMBL CAD25151.1
OrganismEncephalitozoon cuniculi (strain GB-M1) (Microsporidian parasite) [Reference proteome] EMBL CAD25151.1
Taxonomic identifier284813 [NCBI]
Taxonomic lineageEukaryota › Fungi › Microsporidia › Unikaryonidae › Encephalitozoon ›

Protein attributes

Sequence length589 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
Q8SSE3 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: 4B8FEEDF085B41ED

FASTA58967,303
        10         20         30         40         50         60 
MSKILFADFC TVLEKISMTS KRLEIQSIFT DYLRNIRETH PPSMAPALYL SIATVYPEYF 

        70         80         90        100        110        120 
NKELGVGENA LVGIVAEVTG KSSKGVRNEY SKEGDLGTIA MRCRVSQLLI PKTQLEVMDV 

       130        140        150        160        170        180 
FLGMRRVANE EGPRSSSSKK RIILGMMVKC SPLESKYLIR LIEGRLKIGL ALKTVLISLA 

       190        200        210        220        230        240 
NVFSDDKIDE IKAAFNRQPD IGRLADCLLE HGVEGLSTKF QVTPGIPLKP MLSNPSKDLT 

       250        260        270        280        290        300 
SAFKRVENKS FTCEYKYDGE RVQIHRFDSS VETFSRNSEK TTEKYPDLMG LYDVSDRDFI 

       310        320        330        340        350        360 
VDGEIVAYNQ KERRILPFQV LTTRKRKRVE SNKIEVHVCV FVFDLIYFDG RSWIDEPLEE 

       370        380        390        400        410        420 
RRRVLHSSFK EIDGKFHFAE FKDCETPEEA ETFFNKSVEN NFEGMMIKTL GSDATYLPSQ 

       430        440        450        460        470        480 
RSNKWIKIKK DYLESMSDSL DLVVMGAYYG KGRRAGFYGG FLLGVYNDEE EKFEALCKIG 

       490        500        510        520        530        540 
TGFDDSILSK LHEQLSSSLC SAPKNYSYKE SVKPDVWVEA KYVWEVRAAG ISLSPIYSAA 

       550        560        570        580 
WSKGEKGISL RFPRFIRERD DKDVREATTS SQAYQMYLDS KVEHSEEFY

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References

[1]"Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi."
Katinka M.D., Duprat S., Cornillot E., Metenier G., Thomarat F., Prensier G., Barbe V., Peyretaillade E., Brottier P., Wincker P., Delbac F., El Alaoui H., Peyret P., Saurin W., Gouy M., Weissenbach J., Vivares C.P.
Nature 414:450-453(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GB-M1 EMBL CAD25151.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AL590442 Genomic DNA. Translation: CAD25151.1.
RefSeqNP_584647.1. NM_001040836.1.

3D structure databases

ProteinModelPortalQ8SSE3.
ModBaseSearch...

Protein-protein interaction databases

STRING6035.ECU02_1220.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID858637.
KEGGecu:ECU02_1220.

Organism-specific databases

EuPathDBMicrosporidiaDB:ECU02_1220.

Phylogenomic databases

eggNOGCOG1793.
KOK10747.
OMAKHAKPAL.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
SSF117018. SSF117018. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8SSE3_ENCCU
AccessionPrimary (citable) accession number: Q8SSE3
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: May 29, 2013
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info