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Protein

Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic

Gene

Os01g0939600

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May be involved in cell redox homeostasis.By similarity

Catalytic activityi

sn-glycerol 3-phosphate + NAD+ = glycerone phosphate + NADH.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei190NAD; via amide nitrogenBy similarity1
Binding sitei190SubstrateBy similarity1
Binding sitei229NAD; via amide nitrogenBy similarity1
Active sitei279Proton acceptorBy similarity1
Binding sitei341NADBy similarity1
Binding sitei369NADBy similarity1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi42 – 47NADBy similarity6

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductase
LigandNAD

Names & Taxonomyi

Protein namesi
Recommended name:
Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic (EC:1.1.1.8)
Gene namesi
Ordered Locus Names:Os01g0939600, LOC_Os01g71280
ORF Names:B1150F11.17, OsJ_04716
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004201771 – 456Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolicAdd BLAST456

Proteomic databases

PaxDbiQ8S0G4

Expressioni

Gene expression databases

ExpressionAtlasiQ8S0G4 differential
GenevisibleiQ8S0G4 OS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os01g71280.1

Structurei

3D structure databases

ProteinModelPortaliQ8S0G4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni341 – 342Substrate bindingBy similarity2

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG2711 Eukaryota
COG0240 LUCA
HOGENOMiHOG000238366
InParanoidiQ8S0G4
KOiK00006
OMAiDPVPHII
OrthoDBiEOG093609YK

Family and domain databases

Gene3Di1.10.1040.10, 1 hit
InterProiView protein in InterPro
IPR008927 6-PGluconate_DH-like_C_sf
IPR013328 6PGD_dom2
IPR006168 G3P_DH_NAD-dep
IPR006109 G3P_DH_NAD-dep_C
IPR011128 G3P_DH_NAD-dep_N
IPR036291 NAD(P)-bd_dom_sf
PfamiView protein in Pfam
PF07479 NAD_Gly3P_dh_C, 1 hit
PF01210 NAD_Gly3P_dh_N, 1 hit
PRINTSiPR00077 GPDHDRGNASE
SUPFAMiSSF48179 SSF48179, 1 hit
SSF51735 SSF51735, 2 hits

Sequencei

Sequence statusi: Complete.

Q8S0G4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVGSVHVNGS VNGGNGTEER LDELRRLLGK SDGDLLKIVG IGAGAWGSVF
60 70 80 90 100
AALLQDAYGR FREKVQIRIW RRAGRSVDRT TAEHLFEVIN SREDVLRRLI
110 120 130 140 150
RRCAYLKYVE ARLGDRTLYA DEILRDGFCL NMIDTPLCPL KVVTNLQEAV
160 170 180 190 200
WDADIVVNGL PSTETREVFE EISKYWKERI SVPVIISLAK GIEASLDPIP
210 220 230 240 250
RIITPTQMIS SATGVPTENI LYLGGPNIAS EIYNKEYANA RICGSNKWRK
260 270 280 290 300
PLAKFLRQPH FIVWDNSDLV THEVMGGLKN VYAIGAGMVA ALTNESATSK
310 320 330 340 350
SVYFAHCTSE MIFITHLLTE QPEKLAGPLL ADTYVTLLKG RNAWYGQMLA
360 370 380 390 400
KGELSPDMGD SIKGKGMIQG ISAVGAFFEL LSQPSLSVQH PEENKQVAPA
410 420 430 440 450
ELCPILKRLY RILIKRELST RDILQALRDE TMNDPRERIE MAQSHAFYRP

SLLGKP
Length:456
Mass (Da):50,855
Last modified:June 1, 2002 - v1
Checksum:iCE86E8AA3C3D7884
GO

Sequence cautioni

The sequence BAF07264 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003412 Genomic DNA Translation: BAB90253.1
AP008207 Genomic DNA Translation: BAF07264.1 Different initiation.
AP014957 Genomic DNA Translation: BAS76143.1
CM000138 Genomic DNA Translation: EEE55980.1
AK068569 mRNA Translation: BAG90969.1
RefSeqiXP_015627070.1, XM_015771584.1
UniGeneiOs.11390

Genome annotation databases

EnsemblPlantsiOs01t0939600-01; Os01t0939600-01; Os01g0939600
GeneIDi4326512
GrameneiOs01t0939600-01; Os01t0939600-01; Os01g0939600
KEGGiosa:4326512

Similar proteinsi

Entry informationi

Entry nameiGPDH1_ORYSJ
AccessioniPrimary (citable) accession number: Q8S0G4
Secondary accession number(s): A0A0P0VCQ6, Q0JG64
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 28, 2012
Last sequence update: June 1, 2002
Last modified: May 23, 2018
This is version 112 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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