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Q8RZL1 (BGL03_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Beta-glucosidase 3

Short name=Os1bglu3
EC=3.2.1.21
Gene names
Name:BGLU3
Ordered Locus Names:Os01g0813800, LOC_Os01g59840
ORF Names:OSJNBa0085D07.14-1, P0432B10.18
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length505 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sequence similarities

Belongs to the glycosyl hydrolase 1 family.

Sequence caution

The sequence BAB90397.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence BAD82684.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence BAF06515.2 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMDisulfide bond
Glycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-glucosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential
Chain23 – 505483Beta-glucosidase 3
PRO_0000390322

Regions

Region457 – 4582Substrate binding By similarity

Sites

Active site1891Proton donor By similarity
Active site4051Nucleophile By similarity
Binding site431Substrate By similarity
Binding site1431Substrate By similarity
Binding site3331Substrate By similarity
Binding site4501Substrate By similarity

Amino acid modifications

Glycosylation2211N-linked (GlcNAc...) Potential
Glycosylation4151N-linked (GlcNAc...) Potential
Glycosylation4361N-linked (GlcNAc...) Potential
Disulfide bond208 ↔ 217 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q8RZL1 [UniParc].

Last modified December 15, 2009. Version 2.
Checksum: F3852AC1B79EA12C

FASTA50556,647
        10         20         30         40         50         60 
MAAAAAFFCA LLFISVQHGV LGGYTRNDFP ADFVFGAATS AYQYEGAAAE DGRGASIWDT 

        70         80         90        100        110        120 
FTHAGKMKDK STGDVASDGY HKYKGDVKLM TETGLEAYRF SISWSRLIPS GRGAVNQQGL 

       130        140        150        160        170        180 
KYYNNIIDEL TKRGIQVHVM LYHLDLPQAL EDEYAGWLSP RIVEDFTAYA DVCFREFGDR 

       190        200        210        220        230        240 
VSHWTILAEP NVAALGGYDT GEFAPGRCSD PFGVTKCTVG NSSVEPYVAA HNMILTHAAV 

       250        260        270        280        290        300 
VRLYREKYQT LQKGIVGINV LSLWSYPLTD STADLQAAQR YKDFTYGWIL HPLVFGDYPQ 

       310        320        330        340        350        360 
VMKKAIGSRL PSFSKVQTEL VKGTLDFIGV NHYFSLYVSD LPLAKGVRDF IADRSVSCRG 

       370        380        390        400        410        420 
LLQGVRFIAQ TMQAPTRSMG DPHGLQLMLQ HLKESYGDLP IYVQENGKYR KASSNDSLDD 

       430        440        450        460        470        480 
TDRVDYIKGY IEGVLNATRN GVNARGYFAW FFVDMFELLS GYQTRYGLYR VDFDDAALPR 

       490        500 
RAKRSARWYR DFLKSKRQPL QIAQQ 

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence and structure of rice chromosome 1."
Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M. expand/collapse author list , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP003570 Genomic DNA. Translation: BAB90397.1. Sequence problems.
AP004331 Genomic DNA. Translation: BAD82684.1. Sequence problems.
AP008207 Genomic DNA. Translation: BAF06515.2. Sequence problems.
RefSeqNP_001044601.2. NM_001051136.1.
UniGeneOs.51558.

3D structure databases

ProteinModelPortalQ8RZL1.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Proteomic databases

PRIDEQ8RZL1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4327593.
KEGGosa:4327593.

Organism-specific databases

GrameneQ8RZL1.

Phylogenomic databases

eggNOGCOG2723.
HOGENOMHOG000088630.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameBGL03_ORYSJ
AccessionPrimary (citable) accession number: Q8RZL1
Secondary accession number(s): Q0JIB3, Q5N772
Entry history
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: December 15, 2009
Last modified: February 19, 2014
This is version 66 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries