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Q8RZL1

- BGL03_ORYSJ

UniProt

Q8RZL1 - BGL03_ORYSJ

Protein

Beta-glucosidase 3

Gene

BGLU3

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 67 (01 Oct 2014)
      Sequence version 2 (15 Dec 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei43 – 431SubstrateBy similarity
    Binding sitei143 – 1431SubstrateBy similarity
    Active sitei189 – 1891Proton donorBy similarity
    Binding sitei333 – 3331SubstrateBy similarity
    Active sitei405 – 4051NucleophileBy similarity
    Binding sitei450 – 4501SubstrateBy similarity

    GO - Molecular functioni

    1. beta-glucosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH1. Glycoside Hydrolase Family 1.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-glucosidase 3 (EC:3.2.1.21)
    Short name:
    Os1bglu3
    Gene namesi
    Name:BGLU3
    Ordered Locus Names:Os01g0813800, LOC_Os01g59840
    ORF Names:OSJNBa0085D07.14-1, P0432B10.18
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 1

    Organism-specific databases

    GrameneiQ8RZL1.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2222Sequence AnalysisAdd
    BLAST
    Chaini23 – 505483Beta-glucosidase 3PRO_0000390322Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Disulfide bondi208 ↔ 217By similarity
    Glycosylationi221 – 2211N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi415 – 4151N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi436 – 4361N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Disulfide bond, Glycoprotein

    Proteomic databases

    PRIDEiQ8RZL1.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8RZL1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni457 – 4582Substrate bindingBy similarity

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG2723.
    HOGENOMiHOG000088630.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 1 hit.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q8RZL1-1 [UniParc]FASTAAdd to Basket

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    MAAAAAFFCA LLFISVQHGV LGGYTRNDFP ADFVFGAATS AYQYEGAAAE    50
    DGRGASIWDT FTHAGKMKDK STGDVASDGY HKYKGDVKLM TETGLEAYRF 100
    SISWSRLIPS GRGAVNQQGL KYYNNIIDEL TKRGIQVHVM LYHLDLPQAL 150
    EDEYAGWLSP RIVEDFTAYA DVCFREFGDR VSHWTILAEP NVAALGGYDT 200
    GEFAPGRCSD PFGVTKCTVG NSSVEPYVAA HNMILTHAAV VRLYREKYQT 250
    LQKGIVGINV LSLWSYPLTD STADLQAAQR YKDFTYGWIL HPLVFGDYPQ 300
    VMKKAIGSRL PSFSKVQTEL VKGTLDFIGV NHYFSLYVSD LPLAKGVRDF 350
    IADRSVSCRG LLQGVRFIAQ TMQAPTRSMG DPHGLQLMLQ HLKESYGDLP 400
    IYVQENGKYR KASSNDSLDD TDRVDYIKGY IEGVLNATRN GVNARGYFAW 450
    FFVDMFELLS GYQTRYGLYR VDFDDAALPR RAKRSARWYR DFLKSKRQPL 500
    QIAQQ 505
    Length:505
    Mass (Da):56,647
    Last modified:December 15, 2009 - v2
    Checksum:iF3852AC1B79EA12C
    GO

    Sequence cautioni

    The sequence BAB90397.1 differs from that shown. Reason: Erroneous gene model prediction.
    The sequence BAD82684.1 differs from that shown. Reason: Erroneous gene model prediction.
    The sequence BAF06515.2 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003570 Genomic DNA. Translation: BAB90397.1. Sequence problems.
    AP004331 Genomic DNA. Translation: BAD82684.1. Sequence problems.
    AP008207 Genomic DNA. Translation: BAF06515.2. Sequence problems.
    RefSeqiNP_001044601.2. NM_001051136.1.
    UniGeneiOs.51558.

    Genome annotation databases

    GeneIDi4327593.
    KEGGiosa:4327593.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003570 Genomic DNA. Translation: BAB90397.1 . Sequence problems.
    AP004331 Genomic DNA. Translation: BAD82684.1 . Sequence problems.
    AP008207 Genomic DNA. Translation: BAF06515.2 . Sequence problems.
    RefSeqi NP_001044601.2. NM_001051136.1.
    UniGenei Os.51558.

    3D structure databases

    ProteinModelPortali Q8RZL1.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH1. Glycoside Hydrolase Family 1.

    Proteomic databases

    PRIDEi Q8RZL1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4327593.
    KEGGi osa:4327593.

    Organism-specific databases

    Gramenei Q8RZL1.

    Phylogenomic databases

    eggNOGi COG2723.
    HOGENOMi HOG000088630.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence and structure of rice chromosome 1."
      Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.
      , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
      Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    4. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
      Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
      BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiBGL03_ORYSJ
    AccessioniPrimary (citable) accession number: Q8RZL1
    Secondary accession number(s): Q0JIB3, Q5N772
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 15, 2009
    Last sequence update: December 15, 2009
    Last modified: October 1, 2014
    This is version 67 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3