Unreviewed, UniProtKB/TrEMBL Q8RXI1 (Q8RXI1_ARATH)

Names and origin

Protein names

Submitted name:
    Putative chloroplast nucleoid DNA-binding protein EMBL AAL87345.1

Gene names

Name:

At3g18490 EMBL AAL87345.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL AAL87345.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	500 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Belongs to the peptidase A1 family. RuleBase RU000454V1

Ontologies

Keywords
Ligand	DNA-binding
Molecular function	Aspartyl protease RuleBase RU000454V1 Hydrolase Protease
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW aspartic-type endopeptidase activity Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
TRX3	Q42403	1	EBI-449501,EBI-449157

Sequences

	Sequence		Length	Mass (Da)
	Q8RXI1-1 [UniParc]. Last modified June 1, 2002. Version 1. Checksum: A0CE7BC606BBAEE9	FASTA	500	53,220
	10 20 30 40 50 60 MAFPRFLSLL AVVTLSLFLT TTDASSRSLS TPPKTNVLDV VSSLQQTQTI LSLDPTRSSL 70 80 90 100 110 120 TTTKPESLSD PVFFNSSSPL SLELHSRDTF VASQHKDYKS LTLSRLERDS SRVAGIVAKI 130 140 150 160 170 180 RFAVEGVDRS DLKPVYNEDT RYQTEDLTTP VVSGASQGSG EYFSRIGVGT PAKDMYLVLD 190 200 210 220 230 240 TGSDVNWIQC EPCADCYQQS DPVFNPTSSS TYKSLTCSAP QCSLLETSAC RSNKCLYQVS 250 260 270 280 290 300 YGDGSFTVGE LATDTVTFGN SGKINNVALG CGHDNEGLFT GAAGLLGLGG GVLSITNQMK 310 320 330 340 350 360 ATSFSYCLVD RDSGKSSSLD FNSVQLGGGD ATAPLLRNKK IDTFYYVGLS GFSVGGEKVV 370 380 390 400 410 420 LPDAIFDVDA SGSGGVILDC GTAVTRLQTQ AYNSLRDAFL KLTVNLKKGS SSISLFDTCY 430 440 450 460 470 480 DFSSLSTVKV PTVAFHFTGG KSLDLPAKNY LIPVDDSGTF CFAFAPTSSS LSIIGNVQQQ 490 500 GTRITYDLSK NVIGLSGNKC

References

[1]

"Arabidopsis Full Length cDNA Clones." Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T. , Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A. Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AY080874 mRNA. Translation: AAL87345.1.
IPI	IPI00547481.
3D structure databases
HSSP	HSSP built from PDB template 1AVF based on UniProtKB P20142.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q8RXI1. 1 interaction.
Family and domain databases
InterPro	IPR001461. Peptidase_A1. IPR001969. Peptidase_aspartic_AS. IPR009007. Peptidase_aspartic_catalytic. [Graphical view]
Gene3D	G3DSA:2.40.70.10. Pept_Aspartc_cat. 2 hits.
PANTHER	PTHR13683. Peptidase_A1. 1 hit.
Pfam	PF00026. Asp. 1 hit. [Graphical view]
PROSITE	PS00141. ASP_PROTEASE. 1 hit. Uncertain. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8RXI1_ARATH

Accession

Primary (citable) accession number: Q8RXI1

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2002
Last sequence update:	June 1, 2002
Last modified:	June 16, 2009
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)