Q8RXA7 (Q8RXA7_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Stomatal cytokinesis defective EMBL AAL92456.1

Submitted name:
Stomatal cytokinesis defective / SCD1 protein (SCD1) EMBL AEE32385.1

Gene names

Name:	SCD1 EMBL AEE32385.1
Ordered Locus Names:	AT1G49040 EMBL AEE32385.1, At1g49040 TAIR At1g49040

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome] EMBL AAL92456.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	1187 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Domain	Repeat RuleBase RU003532 WD repeat RuleBase RU000362
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	guard mother cell cytokinesis Inferred from mutant phenotype Ref.2. Source: TAIR multidimensional cell growth Inferred from mutant phenotype Ref.2. Source: TAIR
Cellular_component	Cul4-RING ubiquitin ligase complex Inferred from sequence or structural similarity PubMed 18223036. Source: TAIR
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8RXA7 [UniParc]. Last modified June 1, 2002. Version 1. Checksum: D63B27E7D77AED16	FASTA	1,187	131,593
	10 20 30 40 50 60 MGRIFEYFVV CGLGPEMRTV DGDLGFHGMQ TFYLPALLDQ FPPTDQSPYP APPPQLPTCV 70 80 90 100 110 120 LPAGVEFHSS GFVSSDPASF PRSYPIVLTE GDGSKIFVSC IAFRDRVCED IIEAYRLPPN 130 140 150 160 170 180 TYADKCICLV SHAPNFRVLR NSLEEIFVLC FSSEGSCKPL WDIIAYMVSN VPLPTPGKDR 190 200 210 220 230 240 VLFAVENCLL SVEAPPEDSL PQADISLQPL VQCLDVDNLI KLFTSVLVER RILIRSNKYS 250 260 270 280 290 300 LLTLVSESIC HLIYPFRWLQ VYIPLLFFSG VDYIDAPTPY MMGLHSDVDT SNLAMDGVVV 310 320 330 340 350 360 VDLDINQITT SEEIPQIPEP EFSTLRNDIL KLLHPNVVAI DQLKGFGNSV EQCPKSLSKP 370 380 390 400 410 420 WGEDHDLQLR VIFLKCFASI LGGYRNFIEN KVFSTDAFLK RRSRSTNQPP EPMLVQFLGS 430 440 450 460 470 480 FAFLDYLERR LSSDEKSTNL LEKLQDAVGR GQDAMSILPK SSMEPEIITI AEPEVEESAT 490 500 510 520 530 540 RYTYDRFPAS VRSEEQEEKR KQILAAASGA LESNGRHPPS SPPGKNTKED NFSSMERAAE 550 560 570 580 590 600 RERMVLDIQV KLQGLWLRLL KLGSDEDPLS SFEYGTILAL IESDAEGIGG SGFIECIREH 610 620 630 640 650 660 LYSGWHGQLS EEQFIAVKEL LKMAVGRAAS RSDLSTVRDA LEVSAEMFKK DANNVSDYVQ 670 680 690 700 710 720 RHLISIPIWE ELRFWEGYFE YLMEQPANES VNYATLVTAR LIIVASHMAG LGLPDTEAWN 730 740 750 760 770 780 MIETIAEKQK LGYKLLIKLR GFLSHVQQLR VGYWGASSFK QQAISAGLPS PRPKDVSVSD 790 800 810 820 830 840 ETQQPSEASG RSWVQSMFSR DTASRANSFS RVRKWVSDNA SSDITAAAQK KIQTNVRVLK 850 860 870 880 890 900 GHGGAVTALH SVTRREVCDL VGDREDAGFF ISGSTDCLVK IWDPSLRGSE LRATLKGHTG 910 920 930 940 950 960 TVRAISSDRG KIVSGSDDLS VIVWDKQTTQ LLEELKGHDS QVSCVKMLSG ERVLTAAHDG 970 980 990 1000 1010 1020 TVKMWDVRTD MCVATVGRCS SAILSLEYDD STGILAAAGR DTVANIWDIR SGKQMHKLKG 1030 1040 1050 1060 1070 1080 HTKWIRSIRM VEDTLITGSD DWTARVWSVS RGSCDAVLAC HAGPVQSVEY SPFDKGIITG 1090 1100 1110 1120 1130 1140 SADGLLRFWE NDEGGIKCVK NITLHSSSIL SINAGENWLG IGAADNSMSL FHRPSNAGTK 1150 1160 1170 1180 VSGWQLYRVP QRTAAVVRCV ASDLERKRIC SGGRNGVLRL WDATINI

References

[1]	"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W. Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"SCD1 is required for cytokinesis and polarized cell expansion in Arabidopsis thaliana [corrected." Falbel T.G., Koch L.M., Nadeau J.A., Segui-Simarro J.M., Sack F.D., Bednarek S.Y. Development 130:4011-4024(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[3]	TAIR Swarbreck D., Lamesch P., Wilks C., Huala E. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY082605 mRNA. Translation: AAL92456.1. CP002684 Genomic DNA. Translation: AEE32385.1.
IPI	IPI00522154.
RefSeq	NP_850959.1. NM_180628.3.
UniGene	At.38309.
3D structure databases
SMR	Q8RXA7. Positions 126-408, 780-1182.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT1G49040.1; AT1G49040.1; AT1G49040.
GeneID	841327.
KEGG	ath:AT1G49040.
Organism-specific databases
TAIR	At1g49040.
Phylogenomic databases
eggNOG	COG2319.
HOGENOM	HOG000029412.
InParanoid	Q8RXA7.
OMA	YRNFIEN.
ProtClustDB	CLSN2680426.
Gene expression databases
Genevestigator	Q8RXA7.
Family and domain databases
Gene3D	2.130.10.10. 1 hit.
InterPro	IPR005112. dDENN_dom. IPR001194. DENN_dom. IPR020472. G-protein_beta_WD-40_rep. IPR005113. uDENN_dom. IPR015943. WD40/YVTN_repeat-like_dom. IPR001680. WD40_repeat. IPR019775. WD40_repeat_CS. IPR017986. WD40_repeat_dom. [Graphical view]
Pfam	PF03455. dDENN. 1 hit. PF02141. DENN. 1 hit. PF03456. uDENN. 1 hit. PF00400. WD40. 6 hits. [Graphical view]
PRINTS	PR00320. GPROTEINBRPT.
SMART	SM00801. dDENN. 1 hit. SM00799. DENN. 1 hit. SM00800. uDENN. 1 hit. SM00320. WD40. 8 hits. [Graphical view]
SUPFAM	SSF50978. WD40_like. 1 hit.
PROSITE	PS50947. DDENN. 1 hit. PS50211. DENN. 1 hit. PS50946. UDENN. 1 hit. PS00678. WD_REPEATS_1. 4 hits. PS50082. WD_REPEATS_2. 5 hits. PS50294. WD_REPEATS_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8RXA7_ARATH

Accession

Primary (citable) accession number: Q8RXA7

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2002
Last sequence update:	June 1, 2002
Last modified:	May 29, 2013
This is version 77 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)