Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY

Gene

SPY

Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Probable O-linked N-acetylglucosamine transferase (OGT) involved in various processes such as gibberellin (GA) signaling pathway. OGTs catalyze the addition of nucleotide-activated sugars directly onto the polypeptide through O-glycosidic linkage with the hydroxyl of serine or threonine. Probably acts by adding O-linked sugars to yet unknown proteins (By similarity).By similarity

Catalytic activityi

UDP-N-acetyl-D-glucosamine + peptide = UDP + N-acetyl-beta-D-glucosaminyl-peptide.

Pathwayi: protein glycosylation

This protein is involved in the pathway protein glycosylation, which is part of Protein modification.
View all proteins of this organism that are known to be involved in the pathway protein glycosylation and in Protein modification.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Gibberellin signaling pathway

Enzyme and pathway databases

UniPathwayiUPA00378.

Protein family/group databases

CAZyiGT41. Glycosyltransferase Family 41.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC:2.4.1.-)
Short name:
LeSPY
Gene namesi
Name:SPY
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
Proteomesi
  • UP000004994 Componenti: Chromosome 9

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001917791 – 931Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLYAdd BLAST931

Proteomic databases

PaxDbiQ8RVB2.

Interactioni

Protein-protein interaction databases

STRINGi4081.Solyc09g010180.2.1.

Structurei

3D structure databases

ProteinModelPortaliQ8RVB2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati48 – 81TPR 1Add BLAST34
Repeati82 – 115TPR 2Add BLAST34
Repeati116 – 149TPR 3Add BLAST34
Repeati157 – 190TPR 4Add BLAST34
Repeati191 – 224TPR 5Add BLAST34
Repeati225 – 258TPR 6Add BLAST34
Repeati266 – 299TPR 7Add BLAST34
Repeati300 – 333TPR 8Add BLAST34
Repeati334 – 367TPR 9Add BLAST34
Repeati369 – 401TPR 10Add BLAST33
Repeati402 – 435TPR 11Add BLAST34

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni436 – 931Catalytic regionAdd BLAST496

Sequence similaritiesi

Contains 11 TPR repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, TPR repeat

Phylogenomic databases

eggNOGiENOG410IRRE. Eukaryota.
COG3914. LUCA.
InParanoidiQ8RVB2.
OMAiYQAHREW.
OrthoDBiEOG093601FF.

Family and domain databases

Gene3Di1.25.40.10. 3 hits.
InterProiIPR029489. OGT/SEC/SPY_C.
IPR006597. Sel1-like.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF13844. Glyco_transf_41. 2 hits.
PF00515. TPR_1. 4 hits.
PF13374. TPR_10. 1 hit.
PF13181. TPR_8. 1 hit.
[Graphical view]
SMARTiSM00671. SEL1. 4 hits.
SM00028. TPR. 11 hits.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 4 hits.
PROSITEiPS50005. TPR. 10 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8RVB2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAWTEKDVEN GKESESLGNN GFLKGGQSSS GSKGSPGRIS HVKKIFEDKD
60 70 80 90 100
AITYANILRS RNKFVDALAI YESVLEKDSK SIESLIGKGI CLQMQNTGRL
110 120 130 140 150
AFESFSEAIK VDPQNACALT HCGILYKDEG RLVEAAESYE KALKADPSYT
160 170 180 190 200
PAAECLAIVL TDIGTSLKLA GNTQEGIQKY YEAIKIDSHY APAYYNLGVV
210 220 230 240 250
YSEMMQYDMA LNCYEKAALE RPMYAEAYCN MGVIFKNRGD LESAIACYER
260 270 280 290 300
CLAVSPNFEI AKNNMAIALT DLGTKVKLEG DINQGVAYYK KALCYNWHYA
310 320 330 340 350
DAMYNLGVAY GEMLKFDMAI VFYELAFHFN PHCAEACNNL GVIYKDRDNL
360 370 380 390 400
DKAVECYQLA LSIKPNFSQS LNNLGVVYTV QGKMDAAASM IEKAIIANPT
410 420 430 440 450
YAEAYNNLGV LYRDAGNISL AIEAYEQCLK IDPDSRNAGQ NRLLAMNYIN
460 470 480 490 500
EGTDDKLYEA HRDWGRRFMK LYPQYTSWDN SKVPERPLVI GYVSPDYFTH
510 520 530 540 550
SVSYFIEAPL AHHDYTNYKV VVYSSVVKAD AKTNRFRDKV MKKGGLWRDI
560 570 580 590 600
YGIDEKKVSS MIREDKVDIM VELTGHTANN KLGTMACRPA PVQVTWIGYP
610 620 630 640 650
NTTGLPTIDY RITDAMADPP NAKQKHVEEL VRLPNSFLCY TPSPEAGPVC
660 670 680 690 700
PAPALSNGFV TFGSFNNLAK ITPKVLKVWA RILSAVPHSR LIVKCKPFCC
710 720 730 740 750
DSVRQRFLSI LEQLGLEPQR VDLLPLILLN HDHMQAYSLM DISLDTFPYA
760 770 780 790 800
GTTTTCESLY MGVPCVTMGG SVHAHNVGVS LLKTVGLENL VARNEDEYVE
810 820 830 840 850
SAIQLASDVT SLSNLRMSLR ELMSKSPLCD GAKFTRNIES IYRSMWRRYC
860 870 880 890 900
DGDVPSLRRM ELLQQQQTQT ESVVPEESSV NPSERTITSA PTDGSIKENG
910 920 930
FTAVPALALK SSTSEENGVQ SNHNGNHGNL S
Length:931
Mass (Da):103,492
Last modified:June 1, 2002 - v1
Checksum:i1933A81C48132C62
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ312093 Genomic DNA. Translation: CAC85168.1.
AJ312094 mRNA. Translation: CAC85169.1.
RefSeqiNP_001233937.1. NM_001247008.2.
XP_010325708.1. XM_010327406.1.
UniGeneiLes.3463.

Genome annotation databases

EnsemblPlantsiSolyc09g010180.2.1; Solyc09g010180.2.1; Solyc09g010180.2.
GeneIDi543775.
GrameneiSolyc09g010180.2.1; Solyc09g010180.2.1; Solyc09g010180.2.
KEGGisly:543775.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ312093 Genomic DNA. Translation: CAC85168.1.
AJ312094 mRNA. Translation: CAC85169.1.
RefSeqiNP_001233937.1. NM_001247008.2.
XP_010325708.1. XM_010327406.1.
UniGeneiLes.3463.

3D structure databases

ProteinModelPortaliQ8RVB2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4081.Solyc09g010180.2.1.

Protein family/group databases

CAZyiGT41. Glycosyltransferase Family 41.

Proteomic databases

PaxDbiQ8RVB2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSolyc09g010180.2.1; Solyc09g010180.2.1; Solyc09g010180.2.
GeneIDi543775.
GrameneiSolyc09g010180.2.1; Solyc09g010180.2.1; Solyc09g010180.2.
KEGGisly:543775.

Phylogenomic databases

eggNOGiENOG410IRRE. Eukaryota.
COG3914. LUCA.
InParanoidiQ8RVB2.
OMAiYQAHREW.
OrthoDBiEOG093601FF.

Enzyme and pathway databases

UniPathwayiUPA00378.

Family and domain databases

Gene3Di1.25.40.10. 3 hits.
InterProiIPR029489. OGT/SEC/SPY_C.
IPR006597. Sel1-like.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF13844. Glyco_transf_41. 2 hits.
PF00515. TPR_1. 4 hits.
PF13374. TPR_10. 1 hit.
PF13181. TPR_8. 1 hit.
[Graphical view]
SMARTiSM00671. SEL1. 4 hits.
SM00028. TPR. 11 hits.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 4 hits.
PROSITEiPS50005. TPR. 10 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSPY_SOLLC
AccessioniPrimary (citable) accession number: Q8RVB2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: June 1, 2002
Last modified: September 7, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Miscellaneous

Does not correspond to the procera gene.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.