Skip Header

Contribute Send feedback
Read comments (0) or add your own

Reviewed, UniProtKB/Swiss-Prot Q8RUV9 (BGAL1_ORYSJ)

Last modified December 15, 2009. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Hide | Top

Names and origin

Protein namesRecommended name:
    Beta-galactosidase 1
      Short name=Lactase 1
    EC=3.2.1.23
Gene names
Ordered Locus Names: Os01g0533400, LOC_Os01g34920
ORF Names: OJ1029_F04.5, OJ1619_F12.26
OrganismOryza sativa subsp. japonica (Rice)
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza

Hide | Top

Protein attributes

Sequence length827 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level.

Hide | Top

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

Subcellular location

Secreted › extracellular space › apoplast Potential.

Sequence similarities

Belongs to the glycosyl hydrolase 35 family.

Contains 1 SUEL-type lectin domain.

Hide | Top

Ontologies

Keywords
   Cellular componentApoplast
Secreted
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMGlycoprotein
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentapoplast

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionbeta-galactosidase activity

Inferred from electronic annotation. Source: EC

cation binding

Inferred from electronic annotation. Source: InterPro

sugar binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Hide | Top

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential
Chain26 – 827802Beta-galactosidase 1
PRO_0000294152

Regions

Domain746 – 82782SUEL-type lectin

Sites

Active site1871Proton donor Potential
Active site2591Nucleophile Potential

Amino acid modifications

Glycosylation1981N-linked (GlcNAc...) Potential
Glycosylation2491N-linked (GlcNAc...) Potential
Glycosylation2601N-linked (GlcNAc...) Potential
Glycosylation3661N-linked (GlcNAc...) Potential
Glycosylation3921N-linked (GlcNAc...) Potential
Glycosylation5021N-linked (GlcNAc...) Potential
Glycosylation5201N-linked (GlcNAc...) Potential
Glycosylation5781N-linked (GlcNAc...) Potential
Glycosylation5861N-linked (GlcNAc...) Potential
Glycosylation6151N-linked (GlcNAc...) Potential

Hide | Top

Sequences

Sequence LengthMass (Da)Tools
Q8RUV9-1 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: 749E7C4D35FEA80B

FASTA82791,711
        10         20         30         40         50         60 
MMGRRGSSWC RWWVALLVLA VAADAVGCTS VSYDDRSLVI DGQRRIILSG SIHYPRSTPE 

        70         80         90        100        110        120 
MWPDLIKKAK EGGLDAIETY IFWNGHEPHR RQYNFEGNYD VVRFFKEIQN AGMYAILRIG 

       130        140        150        160        170        180 
PYICGEWNYG GLPAWLRDIP GMQFRLHNEP FENEMETFTT LIVNKMKDSK MFAEQGGPII 

       190        200        210        220        230        240 
LAQIENEYGN IMGKLNNNQS ASEYIHWCAD MANKQNVGVP WIMCQQDDDV PHNVVNTCNG 

       250        260        270        280        290        300 
FYCHDWFPNR TGIPKIWTEN WTGWFKAWDK PDFHRSAEDI AFAVAMFFQK RGSLQNYYMY 

       310        320        330        340        350        360 
HGGTNFGRTS GGPYITTSYD YDAPLDEYGN LRQPKYGHLK ELHSVLKSME KTLVHGEYFD 

       370        380        390        400        410        420 
TNYGDNITVT KYTLDSSSAC FINNRFDDKD VNVTLDGATH LLPAWSVSIL PDCKTVAFNS 

       430        440        450        460        470        480 
AKIKTQTSVM VKKPNTAEQE QESLKWSWMP ENLSPFMTDE KGNFRKNELL EQIVTSTDQS 

       490        500        510        520        530        540 
DYLWYRTSLN HKGEGSYKLY VNTTGHELYA FVNGKLIGKN HSADGDFVFQ LESPVKLHDG 

       550        560        570        580        590        600 
KNYISLLSAT VGLKNYGPSF EKMPTGIVGG PVKLIDSNGT AIDLSNSSWS YKAGLASEYR 

       610        620        630        640        650        660 
QIHLDKPGYK WNGNNGTIPI NRPFTWYKAT FEAPSGEDAV VVDLLGLNKG VAWVNGNNLG 

       670        680        690        700        710        720 
RYWPSYTAAE MAGCHRCDYR GAFQAEGDGT RCLTGCGEPS QRYYHVPRSF LAAGEPNTLL 

       730        740        750        760        770        780 
LFEEAGGDPS GVALRTVVPG AVCTSGEAGD AVTLSCGGGH AVSSVDVASF GVGRGRCGGY 

       790        800        810        820 
EGGCESKAAY EAFTAACVGK ESCTVEITGA FAGAGCLSGV LTVQATC

« Hide

Hide | Top

References

« Hide 'large scale' references
[1]"The genome sequence and structure of rice chromosome 1."
Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M. expand/collapse author list , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
Nature 420:312-316(2002) [PubMed: 12447438] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed: 16100779] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana."
The rice annotation project (RAP)
Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed: 12869764] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.

Hide | Top

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP003445 Genomic DNA. Translation: BAB89138.1.
AP003447 Genomic DNA. Translation: BAB90329.1.
AP008207 Genomic DNA. Translation: BAF05166.1.
AK119447 mRNA. No translation available.
RefSeqNP_001043252.1.
UniGeneOs.41043

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGH35. Glycoside Hydrolase Family 35.

Genome annotation databases

GeneID4327808.
KEGGosa:4327808.

Organism-specific databases

GrameneQ8RUV9.

Phylogenomic databases

HOGENOMHBG318019.

Family and domain databases

InterProIPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR017853. Glyco_hydro_catalytic_core.
IPR013781. Glyco_hydro_sg_catalytic.
IPR001944. Glycoside_Hdrlase_35.
IPR000922. Lectin_gal_bd.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHERPTHR23421. Glyco_hydro_35. 1 hit.
PfamPF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSPR00742. GLHYDRLASE35.
PROSITEPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
PS50228. SUEL_LECTIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Hide | Top

Entry information

Entry nameBGAL1_ORYSJ
AccessionPrimary (citable) accession number: Q8RUV9
Entry history
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: June 1, 2002
Last modified: December 15, 2009
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

Hide | Top

Relevant documents

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents