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Q8RUV9

- BGAL1_ORYSJ

UniProt

Q8RUV9 - BGAL1_ORYSJ

Protein

Beta-galactosidase 1

Gene

Os01g0533400

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 75 (01 Oct 2014)
      Sequence version 1 (01 Jun 2002)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei187 – 1871Proton donorSequence Analysis
    Active sitei259 – 2591NucleophileSequence Analysis

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC
    2. carbohydrate binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH35. Glycoside Hydrolase Family 35.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidase 1 (EC:3.2.1.23)
    Short name:
    Lactase 1
    Gene namesi
    Ordered Locus Names:Os01g0533400, LOC_Os01g34920
    ORF Names:OJ1029_F04.5, OJ1619_F12.26
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 1

    Organism-specific databases

    GrameneiQ8RUV9.

    Subcellular locationi

    GO - Cellular componenti

    1. apoplast Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Apoplast, Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2525Sequence AnalysisAdd
    BLAST
    Chaini26 – 827802Beta-galactosidase 1PRO_0000294152Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi198 – 1981N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi249 – 2491N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi260 – 2601N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi366 – 3661N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi392 – 3921N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi502 – 5021N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi520 – 5201N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi578 – 5781N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi586 – 5861N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi615 – 6151N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Proteomic databases

    PRIDEiQ8RUV9.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8RUV9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini746 – 82782SUEL-type lectinPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 35 family.Curated
    Contains 1 SUEL-type lectin domain.PROSITE-ProRule annotation

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG1874.
    OMAiFEREMET.

    Family and domain databases

    Gene3Di2.60.120.260. 2 hits.
    3.20.20.80. 1 hit.
    InterProiIPR008979. Galactose-bd-like.
    IPR019801. Glyco_hydro_35_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR001944. Glycoside_Hdrlase_35.
    IPR017853. Glycoside_hydrolase_SF.
    IPR000922. Lectin_gal-bd_dom.
    [Graphical view]
    PANTHERiPTHR23421. PTHR23421. 1 hit.
    PfamiPF02140. Gal_Lectin. 1 hit.
    PF01301. Glyco_hydro_35. 1 hit.
    [Graphical view]
    PRINTSiPR00742. GLHYDRLASE35.
    SUPFAMiSSF49785. SSF49785. 3 hits.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
    PS50228. SUEL_LECTIN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q8RUV9-1 [UniParc]FASTAAdd to Basket

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    MMGRRGSSWC RWWVALLVLA VAADAVGCTS VSYDDRSLVI DGQRRIILSG    50
    SIHYPRSTPE MWPDLIKKAK EGGLDAIETY IFWNGHEPHR RQYNFEGNYD 100
    VVRFFKEIQN AGMYAILRIG PYICGEWNYG GLPAWLRDIP GMQFRLHNEP 150
    FENEMETFTT LIVNKMKDSK MFAEQGGPII LAQIENEYGN IMGKLNNNQS 200
    ASEYIHWCAD MANKQNVGVP WIMCQQDDDV PHNVVNTCNG FYCHDWFPNR 250
    TGIPKIWTEN WTGWFKAWDK PDFHRSAEDI AFAVAMFFQK RGSLQNYYMY 300
    HGGTNFGRTS GGPYITTSYD YDAPLDEYGN LRQPKYGHLK ELHSVLKSME 350
    KTLVHGEYFD TNYGDNITVT KYTLDSSSAC FINNRFDDKD VNVTLDGATH 400
    LLPAWSVSIL PDCKTVAFNS AKIKTQTSVM VKKPNTAEQE QESLKWSWMP 450
    ENLSPFMTDE KGNFRKNELL EQIVTSTDQS DYLWYRTSLN HKGEGSYKLY 500
    VNTTGHELYA FVNGKLIGKN HSADGDFVFQ LESPVKLHDG KNYISLLSAT 550
    VGLKNYGPSF EKMPTGIVGG PVKLIDSNGT AIDLSNSSWS YKAGLASEYR 600
    QIHLDKPGYK WNGNNGTIPI NRPFTWYKAT FEAPSGEDAV VVDLLGLNKG 650
    VAWVNGNNLG RYWPSYTAAE MAGCHRCDYR GAFQAEGDGT RCLTGCGEPS 700
    QRYYHVPRSF LAAGEPNTLL LFEEAGGDPS GVALRTVVPG AVCTSGEAGD 750
    AVTLSCGGGH AVSSVDVASF GVGRGRCGGY EGGCESKAAY EAFTAACVGK 800
    ESCTVEITGA FAGAGCLSGV LTVQATC 827
    Length:827
    Mass (Da):91,711
    Last modified:June 1, 2002 - v1
    Checksum:i749E7C4D35FEA80B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003445 Genomic DNA. Translation: BAB89138.1.
    AP003447 Genomic DNA. Translation: BAB90329.1.
    AP008207 Genomic DNA. Translation: BAF05166.1.
    AK119447 mRNA. No translation available.
    RefSeqiNP_001043252.1. NM_001049787.1.
    UniGeneiOs.41043.

    Genome annotation databases

    EnsemblPlantsiOS01T0533400-01; OS01T0533400-01; OS01G0533400.
    GeneIDi4327808.
    KEGGiosa:4327808.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003445 Genomic DNA. Translation: BAB89138.1 .
    AP003447 Genomic DNA. Translation: BAB90329.1 .
    AP008207 Genomic DNA. Translation: BAF05166.1 .
    AK119447 mRNA. No translation available.
    RefSeqi NP_001043252.1. NM_001049787.1.
    UniGenei Os.41043.

    3D structure databases

    ProteinModelPortali Q8RUV9.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH35. Glycoside Hydrolase Family 35.

    Proteomic databases

    PRIDEi Q8RUV9.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS01T0533400-01 ; OS01T0533400-01 ; OS01G0533400 .
    GeneIDi 4327808.
    KEGGi osa:4327808.

    Organism-specific databases

    Gramenei Q8RUV9.

    Phylogenomic databases

    eggNOGi COG1874.
    OMAi FEREMET.

    Family and domain databases

    Gene3Di 2.60.120.260. 2 hits.
    3.20.20.80. 1 hit.
    InterProi IPR008979. Galactose-bd-like.
    IPR019801. Glyco_hydro_35_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR001944. Glycoside_Hdrlase_35.
    IPR017853. Glycoside_hydrolase_SF.
    IPR000922. Lectin_gal-bd_dom.
    [Graphical view ]
    PANTHERi PTHR23421. PTHR23421. 1 hit.
    Pfami PF02140. Gal_Lectin. 1 hit.
    PF01301. Glyco_hydro_35. 1 hit.
    [Graphical view ]
    PRINTSi PR00742. GLHYDRLASE35.
    SUPFAMi SSF49785. SSF49785. 3 hits.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS01182. GLYCOSYL_HYDROL_F35. 1 hit.
    PS50228. SUEL_LECTIN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence and structure of rice chromosome 1."
      Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.
      , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
      Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiBGAL1_ORYSJ
    AccessioniPrimary (citable) accession number: Q8RUV9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 10, 2007
    Last sequence update: June 1, 2002
    Last modified: October 1, 2014
    This is version 75 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3