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Protein
Submitted name:

Calpain-like protein

Gene

dek1

Organism
Zea mays (Maize)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protease, Thiol proteaseSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Calpain-like proteinImported
Gene namesi
Name:dek1Imported
OrganismiZea mays (Maize)Imported
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeTripsacinaeZea

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 3429HelicalSequence analysisAdd
BLAST
Transmembranei65 – 9026HelicalSequence analysisAdd
BLAST
Transmembranei96 – 11924HelicalSequence analysisAdd
BLAST
Transmembranei131 – 15222HelicalSequence analysisAdd
BLAST
Transmembranei164 – 18623HelicalSequence analysisAdd
BLAST
Transmembranei238 – 25821HelicalSequence analysisAdd
BLAST
Transmembranei264 – 28219HelicalSequence analysisAdd
BLAST
Transmembranei294 – 31522HelicalSequence analysisAdd
BLAST
Transmembranei321 – 34121HelicalSequence analysisAdd
BLAST
Transmembranei624 – 64421HelicalSequence analysisAdd
BLAST
Transmembranei664 – 68421HelicalSequence analysisAdd
BLAST
Transmembranei696 – 71419HelicalSequence analysisAdd
BLAST
Transmembranei720 – 74223HelicalSequence analysisAdd
BLAST
Transmembranei771 – 79121HelicalSequence analysisAdd
BLAST
Transmembranei820 – 84627HelicalSequence analysisAdd
BLAST
Transmembranei853 – 87422HelicalSequence analysisAdd
BLAST
Transmembranei886 – 90924HelicalSequence analysisAdd
BLAST
Transmembranei921 – 94121HelicalSequence analysisAdd
BLAST
Transmembranei947 – 97024HelicalSequence analysisAdd
BLAST
Transmembranei982 – 100221HelicalSequence analysisAdd
BLAST
Transmembranei1014 – 103623HelicalSequence analysisAdd
BLAST
Transmembranei1057 – 108024HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ8RUQ1.

Interactioni

Protein-protein interaction databases

STRINGi4577.GRMZM2G321753_P01.

Structurei

3D structure databases

ProteinModelPortaliQ8RUQ1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1703 – 2005303Calpain catalyticInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the peptidase C2 family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG0045. Eukaryota.
ENOG410XP0B. LUCA.
HOGENOMiHOG000030613.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR022682. Calpain_domain_III.
IPR022683. Calpain_III.
IPR013320. ConA-like_dom.
IPR000169. Pept_cys_AS.
IPR001300. Peptidase_C2_calpain_cat.
[Graphical view]
PfamiPF01067. Calpain_III. 1 hit.
PF00648. Peptidase_C2. 1 hit.
[Graphical view]
SMARTiSM00720. calpain_III. 1 hit.
SM00230. CysPc. 1 hit.
[Graphical view]
SUPFAMiSSF49758. SSF49758. 1 hit.
SSF49899. SSF49899. 1 hit.
PROSITEiPS50203. CALPAIN_CAT. 1 hit.
PS00139. THIOL_PROTEASE_CYS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8RUQ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEGEGHHGVV LACSICGFLF AVLSPFSFWV LWAVNWRPWR LYSWIYARKW
60 70 80 90 100
PTYVQGPQLS TLCSLLTLCA WLVVISPIAV LLAWGSVLIA LLERNIIGLA
110 120 130 140 150
VIMTGVALLL SFYSIMLWWR TQWQSSKAVA YLLLLAVGLL CAYDFCAIYV
160 170 180 190 200
TAGASASELN SPSGFFFGVS VISLAINMLF ICKILFNVSG FDVDEYVRRS
210 220 230 240 250
YKFAYSDCVE VAPVSCSPEP PDPSELYMTK SSRVKHLGLL YISSLLVLVG
260 270 280 290 300
YSILYGLTSK EARWLGALTS VAVVILDWNL GLCSFRFELL KSRMIVLFVA
310 320 330 340 350
GTSRAFLVSF GVHYWYLGHC ISYAFVASVL LSAAVSSWLS ISNPSVARID
360 370 380 390 400
ALRSTVIKLR EGFRRKGQNS SSNSSEGCGS SVKRSSGSVE AGQNGNATDS
410 420 430 440 450
MYRSNSQSDG VNWSSIPFDR SNSCQEGRSS DKNIDSARAS LAHRSNSCLS
460 470 480 490 500
AVQDSETAVV SVDRHGDPTT SLVCSSSGLE SHGCEPSGSA TTSGNQQLLD
510 520 530 540 550
LNLAAIFQDR LNDPRISSML KKNGGLGDVE LANLLQDKGL DPNFSYMLKD
560 570 580 590 600
KVMDPRILAL LQRSSLDADR EHQDDVDVTA TDSDRLDTTI ANQISLSEEL
610 620 630 640 650
RRSGLEKWLN ISRLIFHHLA GSPIRAFIVF TVMFIIETAT VAIYRPETIK
660 670 680 690 700
VINATHEQFE FGFSILLLSP VVCSIMAFIW SLRAEEMLMT SKPQKYGFIA
710 720 730 740 750
WLLSTCVGLF LSFLSKSSVI LGLSLTVPLM VACLSFAVPI WIRNGYSFWI
760 770 780 790 800
PGREFANREN VSQAPGEKER ALFVITIAVF TASIIGLGAI VSAKPLDALG
810 820 830 840 850
YKGWDADKNS SYSPYATSMY LGWALSSTIA VITTGLIPIV AWFATYRFSP
860 870 880 890 900
SSAICVGLFA TVLVSFCGAS YWGVVNSRED GAPLKADFLA ALLPLLCIPA
910 920 930 940 950
FFSLFTGLYK WKDDDWKISR GVYLFVGMGM LLLFGAVAAV IVTIRPWTVG
960 970 980 990 1000
VACLVAILFL VFVIGVIHYW TSNNFYLTRT QMLLVCSIAF LLALAAFLMG
1010 1020 1030 1040 1050
LFHGKPFVGA SIGYFSFIFL LTGRALTVLL SPPIVVYSPR VLPVYVYDAH
1060 1070 1080 1090 1100
ADSAKNVSYA FLILYGIALA TEVWGVIASL IMNPPFVGAG VSATTLVIAF
1110 1120 1130 1140 1150
SFAVSRPCLT LKMMEDAVHF LSKDTVVQAM SRSANKTRNA ISGTYSAPQR
1160 1170 1180 1190 1200
SASSAALLVG DPALTLDRAG NFVLPRADVM KLRDRLRNEE IAAGSFLCGV
1210 1220 1230 1240 1250
KDCLLICPQS LSNIDYRRNM CAHARILALE EAIDTEWVYM WDKFGGYLLL
1260 1270 1280 1290 1300
LLGLTAKAEQ IQDEVRLRLF LDSIGLSDLS AKEIKKWMPE DRRQFELIQE
1310 1320 1330 1340 1350
SYIREKEMEE EALMQRREEE GKGRERRRAL LEREERKWKE LEISLLSSIP
1360 1370 1380 1390 1400
NTGSRDAAAM AAAVRAVGGD SALEDSFARD RVSSIANHIR KAQLARRAEQ
1410 1420 1430 1440 1450
TGIPGTICIL DDEPRSTGRH CGELDLCLCQ SQKVTLSIAV MVQPVSGPVC
1460 1470 1480 1490 1500
LFGSEFQKVC WEILVAGSEQ GMEAGQVGLR LVTKGERMTT VAKEWNIGAS
1510 1520 1530 1540 1550
SIADGRWHLV TVTLDADLGE ATSFIDGVYD GYQNGLPLPT DNGIWEPGTD
1560 1570 1580 1590 1600
IWVGARPPMD LDAFGRSDSE GSDSKMQIMD AFLWGRCLSE DEVTVLHTAM
1610 1620 1630 1640 1650
SPAEYGFFDL APGDAWHGSY SARVDDWESE EAYELYDQGD VEWDGQYSSG
1660 1670 1680 1690 1700
RKRPVHDAVA IDLDSFARRP RKPRFETRDE VNQRMLSVER AVRDALIAKG
1710 1720 1730 1740 1750
ERNFTDQEFP PEDRSLFVDP MNPPLKLQVV SEWMRPSDIA KEISISCQPC
1760 1770 1780 1790 1800
LFSGSVNSSD VCQGRLGDCW FLSAVAVLTE MSRISEVIIT PEYNDEGIYT
1810 1820 1830 1840 1850
VRFCIQGEWV AVVVDDWIPC ESPGKPAFAT SRKQNELWVS ILEKAYAKLH
1860 1870 1880 1890 1900
GSYEALEGGL VQDALVDLTG GAGEEIDMRS PQAQLDLASG RLWSQLLHFK
1910 1920 1930 1940 1950
QEGFLLGAGS PSGSDAHISS SGIVQGHAYS ILQVREVDGH KLIQIRNPWA
1960 1970 1980 1990 2000
NEVEWNGPWS DSSPEWTERM KHKLMHVPQS KNGVFWMSWQ DFQIHFRSIY
2010 2020 2030 2040 2050
VCRVYPPEMR YSVHGQWRGY NAGGCQDYDS WHQNPQYRLR VTGRDALYPV
2060 2070 2080 2090 2100
HVFITLTQGV GFSRKTNGFR NYQSSHDSSM FYIGMRILKT QGCRAAYNIY
2110 2120 2130 2140 2150
MHESAGGTDY VNSREISCEL VLDPYPKGYT IVPTTIHPGE EAPFVLSVFS

KASIRLEAV
Length:2,159
Mass (Da):238,987
Last modified:June 1, 2002 - v1
Checksum:i971C1A709BA5F5D4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY061804 Genomic DNA. Translation: AAL38187.1.
AY061805 mRNA. Translation: AAL38188.1.
UniGeneiZm.95757.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY061804 Genomic DNA. Translation: AAL38187.1.
AY061805 mRNA. Translation: AAL38188.1.
UniGeneiZm.95757.

3D structure databases

ProteinModelPortaliQ8RUQ1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4577.GRMZM2G321753_P01.

Proteomic databases

PaxDbiQ8RUQ1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG0045. Eukaryota.
ENOG410XP0B. LUCA.
HOGENOMiHOG000030613.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR022682. Calpain_domain_III.
IPR022683. Calpain_III.
IPR013320. ConA-like_dom.
IPR000169. Pept_cys_AS.
IPR001300. Peptidase_C2_calpain_cat.
[Graphical view]
PfamiPF01067. Calpain_III. 1 hit.
PF00648. Peptidase_C2. 1 hit.
[Graphical view]
SMARTiSM00720. calpain_III. 1 hit.
SM00230. CysPc. 1 hit.
[Graphical view]
SUPFAMiSSF49758. SSF49758. 1 hit.
SSF49899. SSF49899. 1 hit.
PROSITEiPS50203. CALPAIN_CAT. 1 hit.
PS00139. THIOL_PROTEASE_CYS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The defective kernel 1 (dek1) gene required for aleurone cell development in the endosperm of maize grains encodes a membrane protein of the calpain gene superfamily."
    Lid S.E., Gruis D., Jung R., Lorentzen J.A., Ananiev E., Chamberlin M., Niu X., Meeley R., Nichols S., Olsen O.A.
    Proc. Natl. Acad. Sci. U.S.A. 99:5460-5465(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Developing endospermImported.

Entry informationi

Entry nameiQ8RUQ1_MAIZE
AccessioniPrimary (citable) accession number: Q8RUQ1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: May 11, 2016
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.