Q8RTL3 (Q8RTL3_9BURK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Oxygenase-beta NBDO EMBL AAL76203.1

Gene names

Name:

nbzAd EMBL AAL76203.1

Organism

Comamonas sp. JS765 EMBL AAL76203.1

Taxonomic identifier

58226 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Comamonas

Protein attributes

Sequence length	194 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Metal-binding PDB 2BMO PDB 2BMQ PDB 2BMR Nickel PDB 2BMO PDB 2BMQ PDB 2BMR
Technical term	3D-structure PDB 2BMO PDB 2BMQ PDB 2BMR
Gene Ontology (GO)
Biological process	cellular aromatic compound metabolic process Inferred from electronic annotation. Source: InterPro oxidation-reduction process Inferred from electronic annotation. Source: InterPro
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW protein binding Inferred from physical interaction Ref.2. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
nbzAc	Q8RTL4	3	EBI-1042214,EBI-1042204

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Metal binding	14	1	Nickel; via tele nitrogen PDB 2BMQ PDB 2BMR
	Metal binding	18	1	Nickel PDB 2BMQ PDB 2BMR
	Metal binding	160	1	Nickel PDB 2BMQ PDB 2BMR

Sequences

	Sequence		Length	Mass (Da)
	Q8RTL3 [UniParc]. Last modified June 1, 2002. Version 1. Checksum: DA5F55AEFA1C4D94	FASTA	194	23,086
	10 20 30 40 50 60 MMINTQEDKL VSAHDAEEFH RFFVGHDSDL QQEVTTLLTR EAHLLDIQAY KAWLEHFVAP 70 80 90 100 110 120 EIKYQVISRE LRSTSERRYQ LNDAVNLYNE NYQQLKVRVE HQMDPQNWAN NPKIRFTRFV 130 140 150 160 170 180 TNVTAAKDKS APEILHVRSN LILHRARREN QVDVFYATRE DKWKRIEGGG IKLVERFVDY 190 PERIPQTHNL LVFL

References

[1]	"Molecular characterization and substrate specificity of nitrobenzene dioxygenase from Comamonas sp. strain JS765." Lessner D.J., Johnson G.R., Parales R.E., Spain J.C., Gibson D.T. Appl. Environ. Microbiol. 68:634-641(2002) [PubMed: 11823201] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: JS765 EMBL AAL76203.1.
[2]	"Structural insight into the dioxygenation of nitroarene compounds: the crystal structure of nitrobenzene dioxygenase." Friemann R., Ivkovic-Jensen M.M., Lessner D.J., Yu C.L., Gibson D.T., Parales R.E., Eklund H., Ramaswamy S. J. Mol. Biol. 348:1139-1151(2005) [PubMed: 15854650] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.20 ANGSTROMS) IN COMPLEX WITH NICKEL.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AF379638 Genomic DNA. Translation: AAL76203.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2BMO	X-ray	1.20	B	1-194	[»]
2BMQ	X-ray	1.55	B	1-194	[»]
2BMR	X-ray	1.50	B	1-194	[»]

ProteinModelPortal

Q8RTL3.

SMR

Q8RTL3. Positions 1-194.

ModBase

Search...

Protein-protein interaction databases

IntAct

Q8RTL3. 1 interaction.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

InterPro

IPR000391. Rng_hydr_dOase-bsu.
[Graphical view]

Pfam

PF00866. Ring_hydroxyl_B. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q8RTL3_9BURK

Accession

Primary (citable) accession number: Q8RTL3

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2002
Last sequence update:	June 1, 2002
Last modified:	October 19, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)