Beta-1,3-xylanase - Alcaligenes sp. XY-234

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Unreviewed, UniProtKB/TrEMBL Q8RS40 (Q8RS40_9BURK)

Last modified June 16, 2009. Version 24. History...

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Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Beta-1,3-xylanase EMBL BAB88993.1

Gene names

Name:

3xynAlc EMBL BAB88993.1

Organism

Alcaligenes sp. XY-234 EMBL BAB88993.1

Taxonomic identifier

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Alcaligenes

Protein attributes

Sequence length	469 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Biological process	Xylan degradation
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q8RS40-1 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: B61058CE40353F58
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469

52,257

        10         20         30         40         50         60 
MKKLAKMISI ATLGACAFSA HALDGKLVPN EGVLVSVGQD VDSVNDYSSA MSTTPAGVTN 

        70         80         90        100        110        120 
YVGIVNLDGL ASNADAGAGR NNVVELANLY PTSALIVGVS MNGQIQNVAQ GQYNANIDTL 

       130        140        150        160        170        180 
IQTLGELDRP VYLRWAYEVD GPWNGHNTED LKQSFRNVYQ RIRELGYGDN ISMIWQVASY 

       190        200        210        220        230        240 
CPTAPGQLSS WWPGDDVVDW VGLSYFAPQD CNWDRVNEAA QWARSHNKPL FINESSPQRY 

       250        260        270        280        290        300 
QLADRTYSSD PAKGTNRQSK TEQQIWSEWF APYFQFMEDN KDILKGFTYI NADWDSQWRW 

       310        320        330        340        350        360 
AAPYNEGYWG DSRVQVLPYI KQQWQDTLEN PKFINHSSDL FAKLGYVADG GDNGGDNGGD 

       370        380        390        400        410        420 
NGGDNGGDNG GDNGGTEPPE NCQDDFNFNY VSDQEIEVYH VDKGWSAGWN YVCLNDYCLP 

       430        440        450        460 
GNKSNGAFRK TFNAVLGQDY KLTFKVEDRY GQGQQILDRN ITFTTQVCN

References

[1]	"Novel carbohydrate-binding module of beta-1,3-xylanase from a marine bacterium, Alcaligenes sp. strain XY-234." Okazaki F., Tamaru Y., Hashikawa S., Li Y.T., Araki T. J. Bacteriol. 184:2399-2403(2002) [PubMed: 11948152] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: XY-234 EMBL BAB88993.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases

AB039953 Genomic DNA. Translation: BAB88993.1.

3D structure databases

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2COV	X-ray	1.25	D/E/F/G/H/I	375-469	[»]

SMR

Q8RS40. Positions 23-346.

ModBase

Protein family/group databases

CAZy

CBM31. Carbohydrate-Binding Module Family 31.
GH26. Glycoside Hydrolase Family 26.

Enzyme and pathway databases

BRENDA

3.2.1.32. 1391.

Family and domain databases

InterPro

IPR013781. Glyco_hydro_sg_catalytic.
[Graphical view]

Gene3D

G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.

ProtoNet

Entry information

Entry name

Q8RS40_9BURK

Accession

Primary (citable) accession number: Q8RS40

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2002
Last sequence update:	June 1, 2002
Last modified:	June 16, 2009
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information