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Unreviewed, UniProtKB/TrEMBL Q8RR73 (Q8RR73_9BACI)

Last modified April 14, 2009. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Pectate lyase P358 EMBL BAB90989.1
Gene names
Name: pelP358 EMBL BAB90989.1
OrganismBacillus sp. P-358 EMBL BAB90989.1
Taxonomic identifier162359 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesBacillaceaeBacillus

Protein attributes

Sequence length1438 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Keywords
   Molecular functionLyase
Gene Ontology (GO)
   Biological processcell wall modification

Inferred from electronic annotation. Source: InterPro

   Cellular componentcell wall

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

lyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

pectinesterase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8RR73-1 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: 4B5544D22C776972

FASTA1,438159,279
        10         20         30         40         50         60 
MCVFKRLSYL TLVVMLAFTS LFSFTSIPLV KAEENIASTF LFEADFNNEI TGEHPAEFDV 

        70         80         90        100        110        120 
SEGGGTIRVT EVPNDTNKSV FLDDTSETLD VNLNKSFDEL VGVVTVQMKF MQPKYTSSTK 

       130        140        150        160        170        180 
VMRLKGDGTP VIIETKDNNI TYRTGSNFDS LVSLEENVWY DIKVEVDLNN QTANVFIDSE 

       190        200        210        220        230        240 
LKLENAPLNQ PTTKIKYFET FTPGSKALGH YVDDIKISGS LLEVEPEQPG EPTPPTEPNT 

       250        260        270        280        290        300 
DGVYEAEDGK LTNSIIDNKH PGFTGTGFVD MVPNAPGGAI EWTIDVPVDG EYTLDFRFAH 

       310        320        330        340        350        360 
GGTDERPSEI KVNGEIIDPK LAFNPSGGWA NWVYTSTNAT LKAGENVIVA TGVGPSGGAN 

       370        380        390        400        410        420 
IDHLKVFMEV DHTYEAEDAL LDENGVIIDN QHLGFTGTGF IDFKPNQPGS WVEWTVNVPT 

       430        440        450        460        470        480 
DGEYFLGFRY ASGGTDARPA EIKVNDKVVA ESLAFDPTGA WATWVYTSTK ATLKAGENKI 

       490        500        510        520        530        540 
RATGVGPSGG ANIDHLRIHN TESGSSDVPI KIEDSNMTDV VSGLYLKKLN ELGILVDIQP 

       550        560        570        580        590        600 
ADTDSITRLE FMALINSKLG LVKKEQFKGL DSESKVWEVS LNEWDSYVLA AAKQAGYMDE 

       610        620        630        640        650        660 
LIKNGKVHPE KTLKKKDAVK IVQKLNGSAV LTNNKDLTWG EAKILVDSIP TEGHSKTVQI 

       670        680        690        700        710        720 
ANVHAVSNNI IAVTLNSSFD DFDFSDINVV YPTGNWSTLS PNFKNLRIDK GAKGVNKFGQ 

       730        740        750        760        770        780 
TVLILNSLDE LNQNGQYIVD PEKVAYKGNL NDAIRRADNL LTWQMEHGGW TKNWSYIYER 

       790        800        810        820        830        840 
PWNGAEPRSE WIANEVELGT IDNDATIKEI LFLAEVYRET GDKRYKESIE KGFEFLFKLQ 

       850        860        870        880        890        900 
YGTGGFAQVY PSRGNYSDYV TFNDEAMINV LELMDDVVEK RYPFDSDVLD DSFNQRIEES 

       910        920        930        940        950        960 
ITSGIDYILK AQIKFPDGTL TAWGAQHDPY TFEPQKARAY EHASVSGQES VGIIRFLMSR 

       970        980        990       1000       1010       1020 
PQTDDIKSSI RAALQWLDDV KLENIRYISG DPNNVYFVED LNSTAWYRFY EIGTNRGIFS 

      1030       1040       1050       1060       1070       1080 
GRDGVIKYNI MEIEEERRNG YSWGGHWGTK LLSIAEETGY FTNNVYIQVI GTNSKDNNGR 

      1090       1100       1110       1120       1130       1140 
TLTESNIKMV KSLDKQINQI KNEIVVAKDG TGNYETIQAA IDAVPINNKI PVTIYIRNGV 

      1150       1160       1170       1180       1190       1200 
YKEVVTVPNN KPFITMIGED PEKTIITYDN FAGRDNGVGG TLGTSGSASV YLRADDFRVT 

      1210       1220       1230       1240       1250       1260 
NVTFENSFDE NSTEVSGKQA VAVYAAGDRQ YFNNVRFIGN QDTLYVHSGS QYYNHVYVEG 

      1270       1280       1290       1300       1310       1320 
DVDFIFGAAS AVFEHSVIHS LDRGSESNNG YITAASTLIT DPYGILIKDS KLTSDVPAGT 

      1330       1340       1350       1360       1370       1380 
VYLGRPWPAG GNPNAKGSVV VMNSELGDHI KGEGWTSMSG LNPEDARLFE YKNFGPGAAI 

      1390       1400       1410       1420       1430 
NESRRQLTDE EATNWTVQNV LKGWDPMEVE VCEKPGNGPK TEKRLKPGTY PVPGYCKK 

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References

[1]"Nucleotide and amino-acid sequences of a bi-functional pectate lyase and pectin methylesterase."
Sawada K., Kobayashi T.
Submitted (JUN-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: P-358 EMBL BAB90989.1.

Cross-references

Sequence databases

AB062880 Genomic DNA. Translation: BAB90989.1.

3D structure databases

HSSPHSSP built from PDB template 1GXO based on UniProtKB Q9F7L3.
ModBaseSearch...

Protein family/group databases

CAZyCBM35. Carbohydrate-Binding Module Family 35.
PL10. Polysaccharide Lyase Family 10.

Family and domain databases

InterProIPR005084. CBM_6.
IPR012669. Pectate_lyase.
IPR012334. Pectin_lyas_fold.
IPR018040. Pectinesterase_AS.
IPR000070. Pectinesterase_cat.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF03422. CBM_6. 2 hits.
PF09492. Pec_lyase. 1 hit.
PF01095. Pectinesterase. 1 hit.
[Graphical view]
TIGRFAMsTIGR02474. pec_lyase. 1 hit.
PROSITEPS51175. CBM6. 2 hits.
PS00503. PECTINESTERASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8RR73_9BACI
AccessionPrimary (citable) accession number: Q8RR73
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: April 14, 2009
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information