Q8RR70 (Q8RR70_PHOLP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Aspartate aminotransferase EMBL BAB86290.1
EC=2.6.1.1 EMBL BAB86290.1

Gene names

Name:

aspC EMBL BAB86290.1

Organism

Phormidium lapideum EMBL BAB86290.1

Taxonomic identifier

32060 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Oscillatoriales › Phormidium

Protein attributes

Sequence length	388 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000479
Sequence similarities	Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU000479

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000479 PDB 1J32
Molecular function	Aminotransferase RuleBase RU000481 EMBL BAB86290.1 Transferase
Technical term	3D-structure PDB 1J32
Gene Ontology (GO)
Molecular function	1-aminocyclopropane-1-carboxylate synthase activity Inferred from electronic annotation. Source: InterPro L-aspartate:2-oxoglutarate aminotransferase activity Inferred from electronic annotation. Source: EC L-phenylalanine:2-oxoglutarate aminotransferase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Amino acid modifications
	Modified residue	237	1	Pyridoxal phosphate PDB 1J32

Sequences

	Sequence		Length	Mass (Da)
	Q8RR70 [UniParc]. Last modified June 1, 2002. Version 1. Checksum: 15989D0C781FEBA2	FASTA	388	42,101
	10 20 30 40 50 60 MKLAARVESV SPSMTLIIDA KAKAMKAEGI DVCSFSAGEP DFNTPKHIVE AAKAALEQGK 70 80 90 100 110 120 TRYGPAAGEP RLREAIAQKL QRDNGLCYGA DNILVTNGGK QSIFNLMLAM IEPGDEVIIP 130 140 150 160 170 180 APFWVSYPEM VKLAEGTPVI LPTTVETQFK VSPEQIRQAI TPKTKLLVFN TPSNPTGMVY 190 200 210 220 230 240 TPDEVRAIAQ VAVEAGLWVL SDEIYEKILY DDAQHLSIGA ASPEAYERSV VCSGFAKTYA 250 260 270 280 290 300 MTGWRVGFLA GPVPLVKAAT KIQGHSTSNV CTFAQYGAIA AYENSQDCVQ EMLAAFAERR 310 320 330 340 350 360 RYMLDALNAM PGLECPKPDG AFYMFPSIAK TGRSSLDFCS ELLDQHQVAT VPGAAFGADD 370 380 CIRLSYATDL DTIKRGMERL EKFLHGIL

References

[1]	"Cloning, structural analysis and expression of the gene encoding aspartate aminotransferase from the thermophilic cyanobacterium Phormidium lapideum." Kim H., Nakaoka M., Yagi M., Ashida H., Hamada K., Shibata H., Sawa Y. J. Biosci. Bioeng. 95:421-424(2003) [PubMed: 16233433] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Structural studies of aspartate aminotransferase from Phormidium lapideum." Kim H., Sawa Y., Hamada K. Submitted (JAN-2003) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS), PYRIDOXAL PHOSPHATE AT LYS-237.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AB063283 Genomic DNA. Translation: BAB86290.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1J32	X-ray	2.10	A/B	1-388	[»]

ProteinModelPortal

Q8RR70.

SMR

Q8RR70. Positions 1-388.

ModBase

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Protocols and materials databases

StructuralBiologyKnowledgebase

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Family and domain databases

InterPro

IPR001176. ACC_synthase.
IPR004839. Aminotransferase_I/II.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase_major_dom.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]

Gene3D

G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit.
G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.

Pfam

PF00155. Aminotran_1_2. 1 hit.
[Graphical view]

PRINTS

PR00753. ACCSYNTHASE.

SUPFAM

SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.

PROSITE

PS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

ProtoNet

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Entry information

Entry name

Q8RR70_PHOLP

Accession

Primary (citable) accession number: Q8RR70

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2002
Last sequence update:	June 1, 2002
Last modified:	November 16, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)