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Q8RR70 (Q8RR70_PHOLP) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.1 EMBL BAB86290.1
Gene names
Name:aspC EMBL BAB86290.1
OrganismPhormidium lapideum EMBL BAB86290.1
Taxonomic identifier32060 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatorialesPhormidium

Protein attributes

Sequence length388 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000479

Sequence similarities

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU000479

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Modified residue2371Pyridoxal phosphate PDB 1J32

Sequences

Sequence LengthMass (Da)Tools
Q8RR70 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: 15989D0C781FEBA2

FASTA38842,101
        10         20         30         40         50         60 
MKLAARVESV SPSMTLIIDA KAKAMKAEGI DVCSFSAGEP DFNTPKHIVE AAKAALEQGK 

        70         80         90        100        110        120 
TRYGPAAGEP RLREAIAQKL QRDNGLCYGA DNILVTNGGK QSIFNLMLAM IEPGDEVIIP 

       130        140        150        160        170        180 
APFWVSYPEM VKLAEGTPVI LPTTVETQFK VSPEQIRQAI TPKTKLLVFN TPSNPTGMVY 

       190        200        210        220        230        240 
TPDEVRAIAQ VAVEAGLWVL SDEIYEKILY DDAQHLSIGA ASPEAYERSV VCSGFAKTYA 

       250        260        270        280        290        300 
MTGWRVGFLA GPVPLVKAAT KIQGHSTSNV CTFAQYGAIA AYENSQDCVQ EMLAAFAERR 

       310        320        330        340        350        360 
RYMLDALNAM PGLECPKPDG AFYMFPSIAK TGRSSLDFCS ELLDQHQVAT VPGAAFGADD 

       370        380 
CIRLSYATDL DTIKRGMERL EKFLHGIL 

« Hide

References

[1]"Cloning, structural analysis and expression of the gene encoding aspartate aminotransferase from the thermophilic cyanobacterium Phormidium lapideum."
Kim H., Nakaoka M., Yagi M., Ashida H., Hamada K., Shibata H., Sawa Y.
J. Biosci. Bioeng. 95:421-424(2003) [PubMed: 16233433] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Structural studies of aspartate aminotransferase from Phormidium lapideum."
Kim H., Sawa Y., Hamada K.
Submitted (JAN-2003) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS), PYRIDOXAL PHOSPHATE AT LYS-237.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB063283 Genomic DNA. Translation: BAB86290.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1J32X-ray2.10A/B1-388[»]
ProteinModelPortalQ8RR70.
SMRQ8RR70. Positions 1-388.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR001176. ACC_synthase.
IPR004839. Aminotransferase_I/II.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase_major_dom.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
Gene3DG3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit.
G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSPR00753. ACCSYNTHASE.
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITEPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8RR70_PHOLP
AccessionPrimary (citable) accession number: Q8RR70
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: November 16, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)