Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q8RP12 (Q8RP12_PSEYM) Unreviewed, UniProtKB/TrEMBL

Last modified September 21, 2011. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Type III effector HrpWPma EMBL AAL84244.1
OrganismPseudomonas syringae pv. maculicola EMBL AAL84244.1
Taxonomic identifier59511 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length424 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Gene Ontology (GO)
   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functionpectate lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8RP12 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: 9C9B7E9E81E3886F

FASTA42442,975
        10         20         30         40         50         60 
MSIGINSTSY QPASTQLDFS ALSGKSPQTD TLAGQNNQAV DAEALLFGSD KQQDVRFGTP 

        70         80         90        100        110        120 
ENTAPNLQNS SQTGDSQSNL VKLFSALIMS LIQMLANTMK NQDTAQDPNE WQDPFQNENG 

       130        140        150        160        170        180 
LGGDTSLADD GGGSTPDATG DGGGDTTSAT GEGGGGDTTS ATGDGSGGNT TSAAGGGGGG 

       190        200        210        220        230        240 
TRSATDSDSG GTPSVTDNGT TPTNKGSAPT GTGPVQVPKA SGDTVVVNQT IKVGAGETFD 

       250        260        270        280        290        300 
GQGKTFTASN ALGDGGQGES QKPLFELAEG ATLKNVNLGQ NEADGIHVKA ATDAKVTIDN 

       310        320        330        340        350        360 
LHAENVGEDL ITVKGEGGAK VTNLDIKNSS AQGADDKIIQ LNADTHLNVD GFKATDFGTM 

       370        380        390        400        410        420 
VCTNGGKQFN DMSIELNGID ASHGKFALVK SDSEDLKLAT GDIAMTDVKH AYDKTKLSTQ 


HTEL

« Hide

References

[1]"A functional screen for the type III (Hrp) secretome of the plant pathogen Pseudomonas syringae."
Guttman D.S., Vinatzer B.A., Sarkar S.F., Ranall M.V., Kettler G., Greenberg J.T.
Science 295:1722-1726(2002) [PubMed: 11872842] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ES4326 EMBL AAL84244.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF458044 Genomic DNA. Translation: AAL84244.1.

3D structure databases

HSSPHSSP built from PDB template 1EE6 based on UniProtKB Q9RHW0.
ProteinModelPortalQ8RP12.
ModBaseSearch...

Protein family/group databases

CAZyPL3. Polysaccharide Lyase Family 3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR004898. Pectate_lyase_cat.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF03211. Pectate_lyase. 1 hit.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ8RP12_PSEYM
AccessionPrimary (citable) accession number: Q8RP12
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: September 21, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info