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Protein
Submitted name:

Endo-1,4-beta-xylanase

Gene

xyl

Organism
Pseudoalteromonas haloplanktis (Alteromonas haloplanktis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Enzyme and pathway databases

BRENDAi3.2.1.8. 5081.

Protein family/group databases

CAZyiGH8. Glycoside Hydrolase Family 8.

Names & Taxonomyi

Protein namesi
Submitted name:
Endo-1,4-beta-xylanaseImported (EC:3.2.1.8Imported)
Gene namesi
Name:xylImported
OrganismiPseudoalteromonas haloplanktis (Alteromonas haloplanktis)Imported
Taxonomic identifieri228 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPseudoalteromonadaceaePseudoalteromonas

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_500431416922 – 426Sequence analysisAdd BLAST405

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi345 ↔ 360Combined sources

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1H12X-ray1.20A22-426[»]
1H13X-ray1.30A22-426[»]
1H14X-ray1.50A22-426[»]
1XW2X-ray1.76A22-426[»]
1XWQX-ray1.88A22-426[»]
1XWTX-ray1.30A22-426[»]
2A8ZX-ray3.20A22-426[»]
2B4FX-ray1.95A22-426[»]
ProteinModelPortaliQ8RJN8.
SMRiQ8RJN8.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8RJN8.

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR002037. Glyco_hydro_8.
[Graphical view]
PfamiPF01270. Glyco_hydro_8. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8RJN8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVFFKITTL LLILISYQSL AAFNNNPSSV GAYSSGTYRN LAQEMGKTNI
60 70 80 90 100
QQKVNSTFDN MFGYNNTQQL YYPYTENGVY KAHYIKAINP DEGDDIRTEG
110 120 130 140 150
QSWGMTAAVM LNKQEEFDNL WRFAKAYQKN PDNHPDAKKQ GVYAWKLKLN
160 170 180 190 200
QNGFVYKVDE GPAPDGEEYF AFALLNASAR WGNSGEFNYY NDAITMLNTI
210 220 230 240 250
KNKLMENQII RFSPYIDNLT DPSYHIPAFY DYFANNVTNQ ADKNYWRQVA
260 270 280 290 300
TKSRTLLKNH FTKVSGSPHW NLPTFLSRLD GSPVIGYIFN GQANPGQWYE
310 320 330 340 350
FDAWRVIMNV GLDAHLMGAQ AWHKSAVNKA LGFLSYAKTN NSKNCYEQVY
360 370 380 390 400
SYGGAQNRGC AGEGQKAANA VALLASTNAG QANEFFNEFW SLSQPTGDYR
410 420
YYNGSLYMLA MLHVSGNFKF YNNTFN
Length:426
Mass (Da):48,407
Last modified:June 1, 2002 - v1
Checksum:i49F5D6C37AEB9F69
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ427921 Genomic DNA. Translation: CAD20872.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ427921 Genomic DNA. Translation: CAD20872.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1H12X-ray1.20A22-426[»]
1H13X-ray1.30A22-426[»]
1H14X-ray1.50A22-426[»]
1XW2X-ray1.76A22-426[»]
1XWQX-ray1.88A22-426[»]
1XWTX-ray1.30A22-426[»]
2A8ZX-ray3.20A22-426[»]
2B4FX-ray1.95A22-426[»]
ProteinModelPortaliQ8RJN8.
SMRiQ8RJN8.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH8. Glycoside Hydrolase Family 8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

BRENDAi3.2.1.8. 5081.

Miscellaneous databases

EvolutionaryTraceiQ8RJN8.

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR002037. Glyco_hydro_8.
[Graphical view]
PfamiPF01270. Glyco_hydro_8. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ8RJN8_PSEHA
AccessioniPrimary (citable) accession number: Q8RJN8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: November 2, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.