xyl

Functionⁱ

GO - Molecular functionⁱ

endo-1,4-beta-xylanase activity Source: UniProtKB-EC

View the complete GO annotation on QuickGO ...

GO - Biological processⁱ

xylan catabolic process Source: UniProtKB-KW

View the complete GO annotation on QuickGO ...

Keywordsⁱ

Molecular function	GlycosidaseImported, Hydrolase
Biological process	Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Enzyme and pathway databases

BRENDAⁱ	3.2.1.8. 5081.

BRENDAⁱ

3.2.1.8. 5081.

Protein family/group databases

Carbohydrate-Active enZymes More...CAZyⁱ	GH8. Glycoside Hydrolase Family 8.

CAZyⁱ

GH8. Glycoside Hydrolase Family 8.

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Endo-1,4-beta-xylanaseImported (EC:3.2.1.8Imported)
Gene namesⁱ	Name:xylImported
Organismⁱ	Pseudoalteromonas haloplanktis (Alteromonas haloplanktis)Imported
Taxonomic identifierⁱ	228 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas

Pathology & Biotechⁱ

Chemistry databases

Drug and drug target database More...DrugBankⁱ	DB03389. alpha-D-Xylopyranose.

DrugBankⁱ

DB03389. alpha-D-Xylopyranose.

PTM / Processingⁱ

Molecule processing

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Signal peptideⁱ	1 – 21	Sequence analysisAdd BLAST		21
ChainⁱPRO_5004314169	22 – 426	Sequence analysisAdd BLAST		405

Amino acid modifications

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Disulfide bondⁱ	345 ↔ 360	Combined sources

Structureⁱ

3D structure databases

Select the link destinations: Protein Data Bank Europe More...PDBeⁱ Protein Data Bank RCSB More...RCSB PDBⁱ Protein Data Bank Japan More...PDBjⁱ Links Updated	PDB entry	Method	Resolution (Å)	Chain	Positions	PDBsum
	1H12	X-ray	1.20	A	22-426	[»]
	1H13	X-ray	1.30	A	22-426	[»]
	1H14	X-ray	1.50	A	22-426	[»]
	1XW2	X-ray	1.76	A	22-426	[»]
	1XWQ	X-ray	1.88	A	22-426	[»]
	1XWT	X-ray	1.30	A	22-426	[»]
	2A8Z	X-ray	3.20	A	22-426	[»]
	2B4F	X-ray	1.95	A	22-426	[»]
ProteinModelPortalⁱ	Q8RJN8.
SMRⁱ	Q8RJN8.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Miscellaneous databases

EvolutionaryTraceⁱ	Q8RJN8.

EvolutionaryTraceⁱ

Q8RJN8.

Family & Domainsⁱ

Keywords - Domainⁱ

SignalSequence analysis

Family and domain databases

Gene3Dⁱ	1.50.10.10. 1 hit.
InterProⁱ	View protein in InterPro IPR008928. 6-hairpin_glycosidase_sf. IPR012341. 6hp_glycosidase-like_sf. IPR002037. Glyco_hydro_8.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF01270. Glyco_hydro_8. 1 hit.
SUPFAMⁱ	SSF48208. SSF48208. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

Sequence processingⁱ: The displayed sequence is further processed into a mature form.

Q8RJN8-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MKVFFKITTL LLILISYQSL AAFNNNPSSV GAYSSGTYRN LAQEMGKTNI 
        60         70         80         90        100
QQKVNSTFDN MFGYNNTQQL YYPYTENGVY KAHYIKAINP DEGDDIRTEG 
       110        120        130        140        150
QSWGMTAAVM LNKQEEFDNL WRFAKAYQKN PDNHPDAKKQ GVYAWKLKLN 
       160        170        180        190        200
QNGFVYKVDE GPAPDGEEYF AFALLNASAR WGNSGEFNYY NDAITMLNTI 
       210        220        230        240        250
KNKLMENQII RFSPYIDNLT DPSYHIPAFY DYFANNVTNQ ADKNYWRQVA 
       260        270        280        290        300
TKSRTLLKNH FTKVSGSPHW NLPTFLSRLD GSPVIGYIFN GQANPGQWYE 
       310        320        330        340        350
FDAWRVIMNV GLDAHLMGAQ AWHKSAVNKA LGFLSYAKTN NSKNCYEQVY 
       360        370        380        390        400
SYGGAQNRGC AGEGQKAANA VALLASTNAG QANEFFNEFW SLSQPTGDYR 
       410        420 
YYNGSLYMLA MLHVSGNFKF YNNTFN

Length:426

Mass (Da):48,407

Last modified:June 1, 2002 - v1

Checksum:ⁱ49F5D6C37AEB9F69

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AJ427921 Genomic DNA. Translation: CAD20872.1.

Select the link destinations:
EMBLⁱ
GenBankⁱ
DDBJⁱ

Links Updated

AJ427921 Genomic DNA. Translation: CAD20872.1.

Protein	Similar proteins	Organisms	Length	Cluster ID	Cluster name	Size
Q8RJN8	UPI0000113656 A0A120N550 A0A0F9TRL3 F2QKE3 A0A063KSA3 A0A221I8N7 G7F6N6 UPI0003FA47B9 UPI0006D675EE UPI000BBE4A20 +5	Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) Pseudoalteromonas sp. An33 marine sediment metagenome Pseudoalteromonas arctica Pseudoalteromonas fuliginea Pseudoalteromonas espejiana DSM 9414 Pseudoalteromonas sp. BSi20429 Pseudoalteromonas sp. TB13 Pseudoalteromonas sp. P1-7a Pseudoalteromonas sp. 1_2015MBL_MicDiv And more	426	UniRef90_Q8RJN8	Cluster: Endo-1,4-beta-xylanase	16

Protein	Similar proteins	Organisms	Length	Cluster ID	Cluster name	Size
Q8RJN8	UPI0000113656 A0A063KSA3 UPI000BBE4A20 UPI000C328127 UPI0003FA47B9 A0A120N550 A0A0F9TRL3 A0A221I8N7 G7F6N6 F2QKE3 +5	Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) Pseudoalteromonas fuliginea Pseudoalteromonas sp. 1_2015MBL_MicDiv Pseudoalteromonas sp. 78C3 Pseudoalteromonas sp. TB13 Pseudoalteromonas sp. An33 marine sediment metagenome Pseudoalteromonas espejiana DSM 9414 Pseudoalteromonas sp. BSi20429 Pseudoalteromonas arctica And more	426	UniRef50_Q8RJN8	Cluster: Endo-1,4-beta-xylanase	16

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AJ427921 Genomic DNA. Translation: CAD20872.1.

Select the link destinations:
EMBLⁱ
GenBankⁱ
DDBJⁱ

Links Updated

AJ427921 Genomic DNA. Translation: CAD20872.1.

3D structure databases

Select the link destinations: Protein Data Bank Europe More...PDBeⁱ Protein Data Bank RCSB More...RCSB PDBⁱ Protein Data Bank Japan More...PDBjⁱ Links Updated	PDB entry	Method	Resolution (Å)	Chain	Positions	PDBsum
	1H12	X-ray	1.20	A	22-426	[»]
	1H13	X-ray	1.30	A	22-426	[»]
	1H14	X-ray	1.50	A	22-426	[»]
	1XW2	X-ray	1.76	A	22-426	[»]
	1XWQ	X-ray	1.88	A	22-426	[»]
	1XWT	X-ray	1.30	A	22-426	[»]
	2A8Z	X-ray	3.20	A	22-426	[»]
	2B4F	X-ray	1.95	A	22-426	[»]
ProteinModelPortalⁱ	Q8RJN8.
SMRⁱ	Q8RJN8.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Chemistry databases

Drug and drug target database More...DrugBankⁱ	DB03389. alpha-D-Xylopyranose.

DrugBankⁱ

DB03389. alpha-D-Xylopyranose.

Protein family/group databases

Carbohydrate-Active enZymes More...CAZyⁱ	GH8. Glycoside Hydrolase Family 8.

CAZyⁱ

GH8. Glycoside Hydrolase Family 8.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Enzyme and pathway databases

BRENDAⁱ	3.2.1.8. 5081.

BRENDAⁱ

3.2.1.8. 5081.

Miscellaneous databases

EvolutionaryTraceⁱ	Q8RJN8.

EvolutionaryTraceⁱ

Q8RJN8.

Family and domain databases

Gene3Dⁱ	1.50.10.10. 1 hit.
InterProⁱ	View protein in InterPro IPR008928. 6-hairpin_glycosidase_sf. IPR012341. 6hp_glycosidase-like_sf. IPR002037. Glyco_hydro_8.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF01270. Glyco_hydro_8. 1 hit.
SUPFAMⁱ	SSF48208. SSF48208. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	Q8RJN8_PSEHA
Accessionⁱ	Q8RJN8Primary (citable) accession number: Q8RJN8
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	June 1, 2002
	Last sequence update:	June 1, 2002
	Last modified:	March 28, 2018
	This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

3D-structureCombined sources

UniProtKB - Q8RJN8 (Q8RJN8_PSEHA)

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Endo-1,4-beta-xylanase

Select a section on the left to see content.

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Keywordsⁱ

Enzyme and pathway databases

Protein family/group databases

Names & Taxonomyⁱ

Pathology & Biotechⁱ

Chemistry databases

PTM / Processingⁱ

Molecule processing

Amino acid modifications

Structureⁱ

3D structure databases

Miscellaneous databases

Family & Domainsⁱ

Keywords - Domainⁱ

Family and domain databases

Sequenceⁱ

Sequence databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Chemistry databases

Protein family/group databases

Protocols and materials databases

Enzyme and pathway databases

Miscellaneous databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - Q8RJN8 (Q8RJN8_PSEHA)

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Endo-1,4-beta-xylanase

xyl

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<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

Enzyme and pathway databases

Protein family/group databases

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Chemistry databases

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Amino acid modifications

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Miscellaneous databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Family and domain databases

Sequence databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Chemistry databases

Protein family/group databases

Protocols and materials databases

Enzyme and pathway databases

Miscellaneous databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Pathology & Biotechⁱ

PTM / Processingⁱ

Structureⁱ

Family & Domainsⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ