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Q8RJN5 (Q8RJN5_STEMA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length540 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3737 Potential EMBL CAC93616.1
Chain38 – 540503peptide amidase EMBL CAC93616.1
PRO_5000067990

Sites

Active site2021Proton donor/acceptor PDB 1M21
Active site2261Nucleophile PDB 1M21
Site1231Important for catalytic activity PDB 1M21

Sequences

Sequence LengthMass (Da)Tools
Q8RJN5 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: ABBA31F903C3EA02

FASTA54057,080
        10         20         30         40         50         60 
MRPSLPPLLT CLLAALPALL SAGCSPATPS AHAAEPASRN VPFPYAETDV ADLQARMTAG 

        70         80         90        100        110        120 
ELDSTTLTQA YLQRIAALDR TGPRLRAVIE LNPDALKEAA ERDRERRDGR LRGPLHGIPL 

       130        140        150        160        170        180 
LLKDNINAAP MATSAGSLAL QGFRPDDAYL VRRLRDAGAV VLGKTNLSEW ANFRGNDSIS 

       190        200        210        220        230        240 
GWSARGGQTR NPYRISHSPC GSSSGSAVAV AANLASVAIG TETDGSIVCP AAINGVVGLK 

       250        260        270        280        290        300 
PTVGLVSRDG IIPISFSQDT AGPMARSVAD AAAVLTAIAG RDDADPATAT MPGRAVYDYT 

       310        320        330        340        350        360 
ARLDPQGLRG KRIGLLQTPL LKYRGMPPLI EQAATELRRA GAVVVPVELP NQGAWAEAER 

       370        380        390        400        410        420 
TLLLYEFKAG LERYFNTHRA PLRSLADLIA FNQAHSKQEL GLFGQELLVE ADATAGLADP 

       430        440        450        460        470        480 
AYIRARSDAR RLAGPEGIDA ALAAHQLDAL VAPTTGVAWP IRSEGDDFPG ESYSAAAVAG 

       490        500        510        520        530        540 
YPSLTVPMGQ IDGLPVGLLF MGTAWSEPKL IEMAYAYEQR TRARRPPHFD TDALIDAGEP 

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References

[1]"Gene cloning, overexpression and biochemical characterization of the peptide amidase from Stenotrophomonas maltophilia."
Neumann S., Kula M.-R.
Appl. Microbiol. Biotechnol. 58:772-780(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 9181 EMBL CAC93616.1.
[2]"An alternative mechanism for amidase signature enzymes."
Labahn J., Neumann S., Buldt G., Kula M.R., Granzin J.
J. Mol. Biol. 322:1053-1064(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS) OF 38-540.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ414049 Genomic DNA. Translation: CAC93616.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1M21X-ray1.80A/B38-540[»]
1M22X-ray1.40A/B38-540[»]
ProteinModelPortalQ8RJN5.
SMRQ8RJN5. Positions 43-529.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.90.1300.10. 1 hit.
InterProIPR000120. Amidase.
IPR023631. Amidase_dom.
[Graphical view]
PANTHERPTHR11895. PTHR11895. 1 hit.
PfamPF01425. Amidase. 1 hit.
[Graphical view]
SUPFAMSSF75304. SSF75304. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ8RJN5.

Entry information

Entry nameQ8RJN5_STEMA
AccessionPrimary (citable) accession number: Q8RJN5
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: April 16, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)