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Q8RIF7 (RL23_FUSNN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L23
Gene names
Name:rplW
Ordered Locus Names:FN1643
OrganismFusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) [Reference proteome] [HAMAP]
Taxonomic identifier190304 [NCBI]
Taxonomic lineageBacteriaFusobacteriaFusobacterialesFusobacteriaceaeFusobacterium

Protein attributes

Sequence length95 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome By similarity. HAMAP-Rule MF_01369

Subunit structure

Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome By similarity.

Sequence similarities

Belongs to the ribosomal protein L23P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionnucleotide binding

Inferred from electronic annotation. Source: InterPro

rRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 959550S ribosomal protein L23 HAMAP-Rule MF_01369
PRO_1000068081

Sequences

Sequence LengthMass (Da)Tools
Q8RIF7 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: 74917A79E8C1C265

FASTA9511,106
        10         20         30         40         50         60 
MNVYDIIKKP VVTEKTELLR KEYNKYTFEV HPKANKIEIK KAVEAIFNVK VEDVATINKK 

        70         80         90 
PITKRHGMRL YKTQAKKKAI VKLAKENTIT YSKEV 

« Hide

References

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE009951 Genomic DNA. Translation: AAL93758.1.
RefSeqNP_602459.1. NC_003454.1.

3D structure databases

ProteinModelPortalQ8RIF7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING190304.FN1643.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL93758; AAL93758; FN1643.
GeneID992881.
KEGGfnu:FN1643.
PATRIC21948811. VBIFusNuc122357_0136.

Phylogenomic databases

eggNOGCOG0089.
HOGENOMHOG000231366.
KOK02892.
OMANTITYSK.
OrthoDBEOG6HTP4P.

Family and domain databases

Gene3D3.30.70.330. 1 hit.
HAMAPMF_01369_B. Ribosomal_L23_B.
InterProIPR012677. Nucleotide-bd_a/b_plait.
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR013025. Ribosomal_L25/23.
[Graphical view]
PfamPF00276. Ribosomal_L23. 1 hit.
[Graphical view]
SUPFAMSSF54189. SSF54189. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRL23_FUSNN
AccessionPrimary (citable) accession number: Q8RIF7
Entry history
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: June 1, 2002
Last modified: May 14, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries