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Q8RDH4 (Q8RDH4_THETN) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 89. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length326 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ABC transporter superfamily. RuleBase RU000684

Contains ABC transporter domain. SAAS SAAS013563

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding44 – 496ATP PDB 4FWI

Sites

Metal binding481Magnesium PDB 4FWI
Metal binding971Magnesium PDB 4FWI
Metal binding1791Magnesium PDB 4FWI
Metal binding2481Iron-sulfur (4Fe-4S); via tele nitrogen PDB 4FWI
Metal binding2851Iron-sulfur (4Fe-4S) PDB 4FWI
Metal binding2911Iron-sulfur (4Fe-4S) PDB 4FWI
Metal binding2981Iron-sulfur (4Fe-4S) PDB 4FWI
Metal binding3161Iron-sulfur (4Fe-4S) PDB 4FWI
Binding site141ATP PDB 4FWI
Binding site611ATP PDB 4FWI
Binding site971ATP PDB 4FWI

Sequences

Sequence LengthMass (Da)Tools
Q8RDH4 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: C3BAE78BDC12F15A

FASTA32636,361
        10         20         30         40         50         60 
MSIIIRVEDL RAVYLVREGT IKAADGISLD ILENSVTAIV GESASGKSTI IEAMTKTLPP 

        70         80         90        100        110        120 
NGRILSGRVL YKGKDLLTMR EEELRKIRWK EIALVPQAAQ QSLNPTMKVI EHFKDTVEAH 

       130        140        150        160        170        180 
GVRWSHSELI EKASEKLRMV RLNPEAVLNS YPLQLSGGMK QRVLIALALL LDPVVLILDE 

       190        200        210        220        230        240 
PTSALDVLTQ AHIIQLLKEL KKMLKITLIF VTHDIAVAAE LADKVAVIYG GNLVEYNSTF 

       250        260        270        280        290        300 
QIFKNPLHPY TRGLINSIMA VNADMSKVKP IPGDPPSLLN PPSGCRFHPR CEYAMEICKK 

       310        320 
EKPKWIRLDG EAHVACHLYE EGRPLK 

« Hide

References

« Hide 'large scale' references
[1]"A complete sequence of the T. tengcongensis genome."
Bao Q., Tian Y., Li W., Xu Z., Xuan Z., Hu S., Dong W., Yang J., Chen Y., Xue Y., Xu Y., Lai X., Huang L., Dong X., Ma Y., Ling L., Tan H., Chen R. expand/collapse author list , Wang J., Yu J., Yang H.
Genome Res. 12:689-700(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15242 / JCM 11007 / NBRC 100824 / MB4.
[2]"Structure of the nucleotide-binding domain of a dipeptide ABC transporter reveals a novel iron-sulfur cluster-binding domain."
Li X., Zhuo W., Yu J., Ge J., Gu J., Feng Y., Yang M., Wang L., Wang N.
Acta Crystallogr. D 69:256-265(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.89 ANGSTROMS) IN COMPLEX WITH ATP; IRON-SULFUR (4FE-4S) AND MAGNESIUM.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE008691 Genomic DNA. Translation: AAM23365.1.
RefSeqNP_621761.1. NC_003869.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4FWIX-ray2.89B1-326[»]
ProteinModelPortalQ8RDH4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING273068.TTE0057.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM23365; AAM23365; TTE0057.
GeneID998051.
KEGGtte:TTE0057.
PATRIC23894751. VBITheTen82880_0054.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02031.
OMAVACWLVE.
OrthoDBEOG6T7N3V.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
InterProIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR010066. Oligo_ATP-bd_C.
IPR013563. Oligopep_ABC_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF00005. ABC_tran. 1 hit.
PF08352. oligo_HPY. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR01727. oligo_HPY. 1 hit.
PROSITEPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8RDH4_THETN
AccessionPrimary (citable) accession number: Q8RDH4
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: June 11, 2014
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)