Q8RDH4 (Q8RDH4_THETN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component EMBL AAM23365.1

Gene names

Name:	DppD EMBL AAM23365.1
Ordered Locus Names:	TTE0057

Organism

Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Caldanaerobacter subterraneus subsp. tengcongensis) [Complete proteome] [HAMAP] EMBL AAM23365.1

Taxonomic identifier

273068 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacteraceae › Caldanaerobacter › Caldanaerobacter subterraneus › Caldanaerobacter subterraneus subsp. tengcongensis

Protein attributes

Sequence length	326 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ABC transporter superfamily. RuleBase RU000684 Contains 1 ABC transporter domain. SAAS SAAS013563

Ontologies

Keywords
Biological process	Transport SAAS SAAS013563
Ligand	ATP-binding RuleBase RU000684 SAAS SAAS013563 Nucleotide-binding
Technical term	3D-structure PDB 4FWI Complete proteome
Gene Ontology (GO)
Biological_process	ATP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATPase activity Inferred from electronic annotation. Source: InterPro peptide transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8RDH4 [UniParc]. Last modified June 1, 2002. Version 1. Checksum: C3BAE78BDC12F15A	FASTA	326	36,361
	10 20 30 40 50 60 MSIIIRVEDL RAVYLVREGT IKAADGISLD ILENSVTAIV GESASGKSTI IEAMTKTLPP 70 80 90 100 110 120 NGRILSGRVL YKGKDLLTMR EEELRKIRWK EIALVPQAAQ QSLNPTMKVI EHFKDTVEAH 130 140 150 160 170 180 GVRWSHSELI EKASEKLRMV RLNPEAVLNS YPLQLSGGMK QRVLIALALL LDPVVLILDE 190 200 210 220 230 240 PTSALDVLTQ AHIIQLLKEL KKMLKITLIF VTHDIAVAAE LADKVAVIYG GNLVEYNSTF 250 260 270 280 290 300 QIFKNPLHPY TRGLINSIMA VNADMSKVKP IPGDPPSLLN PPSGCRFHPR CEYAMEICKK 310 320 EKPKWIRLDG EAHVACHLYE EGRPLK

References

[1]

"A complete sequence of the T. tengcongensis genome." Bao Q., Tian Y., Li W., Xu Z., Xuan Z., Hu S., Dong W., Yang J., Chen Y., Xue Y., Xu Y., Lai X., Huang L., Dong X., Ma Y., Ling L., Tan H., Chen R. , Wang J., Yu J., Yang H. Genome Res. 12:689-700(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 15242 / JCM 11007 / NBRC 100824 / MB4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE008691 Genomic DNA. Translation: AAM23365.1.

RefSeq

NP_621761.1. NC_003869.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4FWI	X-ray	2.89	B	1-326	[»]

ProteinModelPortal

Q8RDH4.

ModBase

Search...

Protein-protein interaction databases

STRING

273068.TTE0057.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

AAM23365; AAM23365; TTE0057.

GeneID

998051.

KEGG

tte:TTE0057.

PATRIC

23894751. VBITheTen82880_0054.

Organism-specific databases

CMR

Search...

Phylogenomic databases

KO

K02031.

OMA

EYAMEIC.

ProtClustDB

CLSK900599.

Family and domain databases

InterPro

IPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR010066. Oligo_ATP-bd_C.
IPR013563. Oligopep_ABC_C.
[Graphical view]

Pfam

PF00005. ABC_tran. 1 hit.
PF08352. oligo_HPY. 1 hit.
[Graphical view]

SMART

SM00382. AAA. 1 hit.
[Graphical view]

TIGRFAMs

TIGR01727. oligo_HPY. 1 hit.

PROSITE

PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q8RDH4_THETN

Accession

Primary (citable) accession number: Q8RDH4

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2002
Last sequence update:	June 1, 2002
Last modified:	May 1, 2013
This is version 81 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)