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Protein
Submitted name:

Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1

Gene

B3gat1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

TransferaseImported

Enzyme and pathway databases

ReactomeiR-MMU-1971475. A tetrasaccharide linker sequence is required for GAG synthesis.

Protein family/group databases

CAZyiGT43. Glycosyltransferase Family 43.

Names & Taxonomyi

Protein namesi
Submitted name:
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1Imported
Submitted name:
UDP-glucuronyltransferase-PImported
Gene namesi
Name:B3gat1Imported
Synonyms:GlcAT-PImported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 9

Organism-specific databases

MGIiMGI:1924148. B3gat1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei20 – 3819HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000125700.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1476. Eukaryota.
ENOG410XP79. LUCA.
GeneTreeiENSGT00390000017640.
HOVERGENiHBG050650.
KOiK00735.
OMAiKDEGSDP.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR005027. Glyco_trans_43.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PfamiPF03360. Glyco_transf_43. 1 hit.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8R531-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGNEELWVQP ALEMPKRRDI LAIVLIVLPW TLLITVWHQS SLAPLLAVHK
60 70 80 90 100
DEGSDPRHEA PPGADPREYC MSDRDIVEVV RTEYVYTRPP PWSDTLPTIH
110 120 130 140 150
VVTPTYSRPV QKAELTRMAN TLLHVPNLHW LVVEDAPRRT PLTARLLRDT
160 170 180 190 200
GLNYTHLHVE TPRNYKLRGD ARDPRIPRGT MQRNLALRWL RETFPRNSTQ
210 220 230 240 250
PGVVYFADDD NTYSLELFEE MRSTRRVSVW PVAFVGGLRY EAPRVNGAGK
260 270 280 290 300
VVGWKTVFDP HRPFAIDMAG FAVNLRLILQ RSQAYFKLRG VKGGYQESSL
310 320 330 340
LRELVTLNDL EPKAANCTKI LVWHTRTEKP VLVNEGKKGF TDPSVEI
Length:347
Mass (Da):39,735
Last modified:June 1, 2002 - v1
Checksum:iCD4997A7E0BEDD12
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC109831 Genomic DNA. No translation available.
AC161424 Genomic DNA. No translation available.
AB055781 mRNA. Translation: BAB85676.1.
AK082739 mRNA. Translation: BAC38594.1.
PIRiJC7828.
RefSeqiNP_001297695.1. NM_001310766.1.
UniGeneiMm.218788.

Genome annotation databases

EnsembliENSMUST00000115269; ENSMUSP00000110924; ENSMUSG00000045994.
ENSMUST00000159799; ENSMUSP00000124438; ENSMUSG00000045994.
ENSMUST00000160899; ENSMUSP00000124067; ENSMUSG00000045994.
GeneIDi76898.
KEGGimmu:76898.
UCSCiuc009opp.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC109831 Genomic DNA. No translation available.
AC161424 Genomic DNA. No translation available.
AB055781 mRNA. Translation: BAB85676.1.
AK082739 mRNA. Translation: BAC38594.1.
PIRiJC7828.
RefSeqiNP_001297695.1. NM_001310766.1.
UniGeneiMm.218788.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000125700.

Protein family/group databases

CAZyiGT43. Glycosyltransferase Family 43.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000115269; ENSMUSP00000110924; ENSMUSG00000045994.
ENSMUST00000159799; ENSMUSP00000124438; ENSMUSG00000045994.
ENSMUST00000160899; ENSMUSP00000124067; ENSMUSG00000045994.
GeneIDi76898.
KEGGimmu:76898.
UCSCiuc009opp.1. mouse.

Organism-specific databases

CTDi27087.
MGIiMGI:1924148. B3gat1.

Phylogenomic databases

eggNOGiKOG1476. Eukaryota.
ENOG410XP79. LUCA.
GeneTreeiENSGT00390000017640.
HOVERGENiHBG050650.
KOiK00735.
OMAiKDEGSDP.

Enzyme and pathway databases

ReactomeiR-MMU-1971475. A tetrasaccharide linker sequence is required for GAG synthesis.

Miscellaneous databases

SOURCEiSearch...

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR005027. Glyco_trans_43.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PfamiPF03360. Glyco_transf_43. 1 hit.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  5. "Molecular Cloning, and Genomic Analysis of Mouse Glucuronyltransferase Involved in the Biosynthesis of the HNK-1 Epitope."
    Yamamoto S.
    Submitted (FEB-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BALB/cImported.
    Tissue: BrainImported.
  6. "Molecular cloning and genomic analysis of mouse glucuronyltransferase involved in biosynthesis of the HNK-1 epitope."
    Yamamoto S., Oka S., Saito-Ohara F., Inazawa J., Kawasaki T.
    J. Biochem. 131:337-347(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  7. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  9. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  10. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  11. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  12. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ8R531_MOUSE
AccessioniPrimary (citable) accession number: Q8R531
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: July 6, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.