Q8R408 (Q8R408_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
NMDA R1 receptor C1 cassette EMBL AAM09025.1

Gene names

Name:

Grin1 RGD 2736

Organism

Rattus norvegicus (Rat) EMBL AAM09025.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	37 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Molecular function	Receptor EMBL AAM09025.1
Gene Ontology (GO)
Biological_process	adult locomotory behavior Inferred from electronic annotation. Source: Compara cellular calcium ion homeostasis Inferred from electronic annotation. Source: Compara cerebral cortex development Inferred from electronic annotation. Source: Compara conditioned taste aversion Inferred from electronic annotation. Source: Compara long-term memory Inferred from electronic annotation. Source: Compara male mating behavior Inferred from electronic annotation. Source: Compara negative regulation of neuron apoptotic process Inferred from electronic annotation. Source: Compara olfactory learning Inferred from electronic annotation. Source: Compara pons maturation Inferred from electronic annotation. Source: Compara positive regulation of apoptotic process Inferred from electronic annotation. Source: Compara positive regulation of transcription from RNA polymerase II promoter Inferred from electronic annotation. Source: Compara prepulse inhibition Inferred from electronic annotation. Source: Compara propylene metabolic process Inferred from electronic annotation. Source: Compara regulation of axonogenesis Inferred from electronic annotation. Source: Compara regulation of dendrite morphogenesis Inferred from electronic annotation. Source: Compara regulation of excitatory postsynaptic membrane potential Inferred from electronic annotation. Source: Compara regulation of long-term neuronal synaptic plasticity Inferred from electronic annotation. Source: Compara regulation of respiratory gaseous exchange Inferred from electronic annotation. Source: Compara regulation of synapse assembly Inferred from electronic annotation. Source: Compara respiratory gaseous exchange Inferred from electronic annotation. Source: Compara response to amphetamine Inferred from electronic annotation. Source: Compara response to morphine Inferred from electronic annotation. Source: Compara sensory perception of pain Inferred from electronic annotation. Source: Compara social behavior Inferred from electronic annotation. Source: Compara suckling behavior Inferred from electronic annotation. Source: Compara synaptic transmission, glutamatergic Inferred from electronic annotation. Source: Compara visual learning Inferred from electronic annotation. Source: Compara
Cellular_component	N-methyl-D-aspartate selective glutamate receptor complex Inferred from electronic annotation. Source: Compara cell surface Inferred from electronic annotation. Source: Compara postsynaptic density Inferred from electronic annotation. Source: Compara postsynaptic membrane Inferred from electronic annotation. Source: Compara synaptic vesicle Inferred from electronic annotation. Source: Compara
Molecular_function	N-methyl-D-aspartate selective glutamate receptor activity Inferred from electronic annotation. Source: Compara calcium channel activity Inferred from electronic annotation. Source: Compara calcium ion binding Inferred from electronic annotation. Source: Compara glycine binding Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAM09025.1
	Non-terminal residue	37	1	EMBL AAM09025.1

Sequences

	Sequence		Length	Mass (Da)
	Q8R408 [UniParc]. Last modified June 1, 2002. Version 1. Checksum: CAD32CB57F3C9E7D	FASTA	37	4,182
	10 20 30 DRKSGRAEPD PKKKATFRAI TSTLASSFKR RRSSKDT

References

[1]	"Region-specific alternative splicing in the nervous system: implications for regulation by the RNA-binding protein NAPOR." Zhang W., Liu H., Han K., Grabowski P.J. RNA 8:671-685(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Sprague-Dawley EMBL AAM09025.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY090615 Transcribed RNA. Translation: AAM09025.1.
IPI	IPI00198625.
UniGene	Rn.9840.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q8R408.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
RGD	2736. Grin1.
Phylogenomic databases
InParanoid	Q8R408.
Gene expression databases
ArrayExpress	Q8R408.
Genevestigator	Q8R408.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

Q8R408_RAT

Accession

Primary (citable) accession number: Q8R408

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2002
Last sequence update:	June 1, 2002
Last modified:	April 3, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)