Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

snRNA-activating protein complex subunit 5

Gene

Snapc5

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Part of the SNAPc complex required for the transcription of both RNA polymerase II and III small-nuclear RNA genes. Binds to the proximal sequence element (PSE), a non-TATA-box basal promoter element common to these 2 types of genes. Recruits TBP and BRF2 to the U6 snRNA TATA box (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
snRNA-activating protein complex subunit 5
Short name:
SNAPc subunit 5
Alternative name(s):
Small nuclear RNA-activating complex polypeptide 5
snRNA-activating protein complex 19 kDa subunit
Short name:
SNAPc 19 kDa subunit
Gene namesi
Name:Snapc5
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Unplaced

Organism-specific databases

MGIiMGI:1914282 Snapc5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000720291 – 98snRNA-activating protein complex subunit 5Add BLAST98

Proteomic databases

PaxDbiQ8R2K7
PRIDEiQ8R2K7

PTM databases

PhosphoSitePlusiQ8R2K7

Interactioni

Subunit structurei

Part of the SNAPc complex composed of 5 subunits: SNAPC1, SNAPC2, SNAPC3, SNAPC4 and SNAPC5. SNAPC5 interacts with SNAPC4 (By similarity).By similarity

Protein-protein interaction databases

BioGridi237056, 2 interactors
STRINGi10090.ENSMUSP00000034965

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi86 – 95Poly-Glu10

Phylogenomic databases

eggNOGiENOG410J33C Eukaryota
ENOG4112ANI LUCA
HOGENOMiHOG000013144
HOVERGENiHBG055993
InParanoidiQ8R2K7
KOiK15211
PhylomeDBiQ8R2K7

Family and domain databases

InterProiView protein in InterPro
IPR029138 SNAPC5
PfamiView protein in Pfam
PF15497 SNAPc19, 1 hit

Sequencei

Sequence statusi: Complete.

Q8R2K7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSRLQELRK EEETLLRLKA ALHDQLNRLK VEELALQSMI NSRGRTETLS
60 70 80 90
SQPAPEQLCD MSLHVDNEVT INQTTLKLST RSPMEEEEEE EEEEESDS
Length:98
Mass (Da):11,340
Last modified:June 1, 2002 - v1
Checksum:iB33117DFA0A2FCE3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC028529 mRNA Translation: AAH28529.1
RefSeqiNP_899139.2, NM_183316.2
UniGeneiMm.24082

Genome annotation databases

GeneIDi330959
KEGGimmu:330959

Similar proteinsi

Entry informationi

Entry nameiSNPC5_MOUSE
AccessioniPrimary (citable) accession number: Q8R2K7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 15, 2005
Last sequence update: June 1, 2002
Last modified: March 28, 2018
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health