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Q8R1U8 (Q8R1U8_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Efemp1 EMBL AAH23060.1 MGI 1339998
OrganismMus musculus (Mouse) EMBL AAH23060.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length188 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAH23060.1

Sequences

Sequence LengthMass (Da)Tools
Q8R1U8 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: 427A790838F116CB

FASTA18821,564
        10         20         30         40         50         60 
QYQCVNEPGK FSCMCPQGYE VVRSRTCQDI NECETTNECR EDEMCWNYHG GFRCYPRNPC 

        70         80         90        100        110        120 
QDHYVLTSEN RCVCPVSNTM CRELPQSIVY KYMSIRSDRS VPSDIFQIQA TMIYANTINT 

       130        140        150        160        170        180 
FRIKSGNENG EFYLRQTSPV SAMLVLVKSL SGPREYIVDL EMLTVSSIGT FRTSSVLRLT 


IIVGPFSF 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Eye EMBL AAH23060.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC023060 mRNA. Translation: AAH23060.1.
UniGeneMm.44176.

3D structure databases

ProteinModelPortalQ8R1U8.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ8R1U8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:1339998. Efemp1.

Phylogenomic databases

HOVERGENHBG051560.
InParanoidQ8R1U8.

Gene expression databases

ArrayExpressQ8R1U8.
BgeeQ8R1U8.
GenevestigatorQ8R1U8.

Family and domain databases

InterProIPR001881. EGF-like_Ca-bd_dom.
IPR013032. EGF-like_CS.
IPR018097. EGF_Ca-bd_CS.
[Graphical view]
PfamPF07645. EGF_CA. 1 hit.
[Graphical view]
PROSITEPS01186. EGF_2. 1 hit.
PS01187. EGF_CA. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

SOURCESearch...

Entry information

Entry nameQ8R1U8_MOUSE
AccessionPrimary (citable) accession number: Q8R1U8
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: March 19, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)