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Q8R1U8

- Q8R1U8_MOUSE

UniProt

Q8R1U8 - Q8R1U8_MOUSE

Protein
Submitted name:

Efemp1 protein

Gene

Efemp1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 65 (01 Oct 2014)
      Sequence version 1 (01 Jun 2002)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro
    2. epidermal growth factor-activated receptor activity Source: Ensembl

    GO - Biological processi

    1. negative regulation of chondrocyte differentiation Source: Ensembl
    2. regulation of transcription, DNA-templated Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Efemp1 proteinImported
    Gene namesi
    Name:Efemp1Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:1339998. Efemp1.

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular matrix Source: Ensembl
    2. extracellular space Source: Ensembl

    PTM / Processingi

    Proteomic databases

    PRIDEiQ8R1U8.

    Expressioni

    Gene expression databases

    ArrayExpressiQ8R1U8.
    BgeeiQ8R1U8.
    GenevestigatoriQ8R1U8.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8R1U8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOVERGENiHBG051560.
    InParanoidiQ8R1U8.

    Family and domain databases

    InterProiIPR001881. EGF-like_Ca-bd_dom.
    IPR013032. EGF-like_CS.
    IPR018097. EGF_Ca-bd_CS.
    [Graphical view]
    PfamiPF07645. EGF_CA. 1 hit.
    [Graphical view]
    PROSITEiPS01186. EGF_2. 1 hit.
    PS01187. EGF_CA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q8R1U8-1 [UniParc]FASTAAdd to Basket

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    QYQCVNEPGK FSCMCPQGYE VVRSRTCQDI NECETTNECR EDEMCWNYHG    50
    GFRCYPRNPC QDHYVLTSEN RCVCPVSNTM CRELPQSIVY KYMSIRSDRS 100
    VPSDIFQIQA TMIYANTINT FRIKSGNENG EFYLRQTSPV SAMLVLVKSL 150
    SGPREYIVDL EMLTVSSIGT FRTSSVLRLT IIVGPFSF 188
    Length:188
    Mass (Da):21,564
    Last modified:June 1, 2002 - v1
    Checksum:i427A790838F116CB
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC023060 mRNA. Translation: AAH23060.1.
    UniGeneiMm.44176.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC023060 mRNA. Translation: AAH23060.1 .
    UniGenei Mm.44176.

    3D structure databases

    ProteinModelPortali Q8R1U8.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q8R1U8.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    MGIi MGI:1339998. Efemp1.

    Phylogenomic databases

    HOVERGENi HBG051560.
    InParanoidi Q8R1U8.

    Miscellaneous databases

    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q8R1U8.
    Bgeei Q8R1U8.
    Genevestigatori Q8R1U8.

    Family and domain databases

    InterProi IPR001881. EGF-like_Ca-bd_dom.
    IPR013032. EGF-like_CS.
    IPR018097. EGF_Ca-bd_CS.
    [Graphical view ]
    Pfami PF07645. EGF_CA. 1 hit.
    [Graphical view ]
    PROSITEi PS01186. EGF_2. 1 hit.
    PS01187. EGF_CA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: EyeImported.

    Entry informationi

    Entry nameiQ8R1U8_MOUSE
    AccessioniPrimary (citable) accession number: Q8R1U8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2002
    Last sequence update: June 1, 2002
    Last modified: October 1, 2014
    This is version 65 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)