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Protein
Submitted name:

Smarca4 protein

Gene

Smarca4

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Smarca4 proteinImported
Gene namesi
Name:Smarca4Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:88192 Smarca4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PeptideAtlasiQ8R0K1
PRIDEiQ8R0K1

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

IntActiQ8R0K1, 1 interactor
MINTiQ8R0K1

Structurei

3D structure databases

ProteinModelPortaliQ8R0K1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 67Helicase ATP-bindingInterPro annotationAdd BLAST67
Domaini220 – 382Helicase C-terminalInterPro annotationAdd BLAST163
Domaini579 – 649BromoInterPro annotationAdd BLAST71

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili500 – 520Sequence analysisAdd BLAST21

Keywords - Domaini

BromodomainPROSITE-ProRule annotation, Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0386 Eukaryota
COG0553 LUCA
COG5076 LUCA
HOVERGENiHBG056636

Family and domain databases

CDDicd00079 HELICc, 1 hit
Gene3Di1.20.920.10, 1 hit
3.40.50.10810, 1 hit
InterProiView protein in InterPro
IPR030100 BRG1
IPR001487 Bromodomain
IPR036427 Bromodomain-like_sf
IPR018359 Bromodomain_CS
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR029295 SnAC
IPR038718 SNF2-like_sf
IPR000330 SNF2_N
PANTHERiPTHR10799:SF76 PTHR10799:SF76, 1 hit
PfamiView protein in Pfam
PF00439 Bromodomain, 1 hit
PF00271 Helicase_C, 1 hit
PF14619 SnAC, 1 hit
PF00176 SNF2_N, 1 hit
PRINTSiPR00503 BROMODOMAIN
SMARTiView protein in SMART
SM00297 BROMO, 1 hit
SM00490 HELICc, 1 hit
SM01314 SnAC, 1 hit
SUPFAMiSSF47370 SSF47370, 1 hit
SSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS00633 BROMODOMAIN_1, 1 hit
PS50014 BROMODOMAIN_2, 1 hit
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit

Sequencei

Sequence statusi: Fragment.

Q8R0K1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
KDKHILAKIR WKYMIVDEGH RMKNHHCKLT QVLNTHYVAP RRLLLTGTPL
60 70 80 90 100
QNKLPELWAL LNFLLPTIFK SCSTFEQWFN APFAMTGEKV DLNEEETILI
110 120 130 140 150
IRRLHKVLRP FLLRRLKKEV EAQLPEKVEY VIKCDMSALQ RVLYRHMQAK
160 170 180 190 200
GVLLTDGSEK DKKGKGGTKT LMNTIMQLRK ICNHPYMFQH IEESFSEHLG
210 220 230 240 250
FTGGIVQGLD LYRASGKFEL LDRILPKLRA TNHKVLLFCQ MTSLMTIMED
260 270 280 290 300
YFAYRGFKYL RLDGTTKAED RGMLLKTFNE PGSEYFIFLL STRAGGLGLN
310 320 330 340 350
LQSADTVIIF DSDWNPHQDL QAQDRAHRIG QQNEVRVLRL CTVNSVEEKI
360 370 380 390 400
LAAAKYKLNV DQKVIQAGMF DQKSSSHERR AFLQAILEHE EQDEEEDEVP
410 420 430 440 450
DDETVNQMIA RHEEEFDLFM RMDLDRRREE ARNPKRKPRL MEEDELPSWI
460 470 480 490 500
IKDDAEVERL TCEEEEEKMF GRGSRHRKEV DYSDSLTEKQ WLKAIEEGTL
510 520 530 540 550
EEIEEEVRQK KSSRKRKRDS EAGSSTPTTS TRSRDKDEES KKQKKRGRPP
560 570 580 590 600
AEKLSPNPPN LTKKMKKIVD AVIKYKDSSG RQLSEVFIQL PSRKELPEYY
610 620 630 640 650
ELIRKPVDFK KIKERIRNHK YRSLNDLEKD VMLLCQNAQT FNLEGSLIYE
660 670 680 690 700
DSIVLQSVFT SVRQKIEKED DSEGEESEEE EEGEEEGSES ESRSVKVKIK
710 720 730 740
LGRKEKAQDR LKGGRRRPSR GSRAKPVVSD DDSEEEQEED RSGSGSEED
Length:749
Mass (Da):87,280
Last modified:June 1, 2002 - v1
Checksum:i1FB0CBB0561A55BA
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC026672 mRNA Translation: AAH26672.1
UniGeneiMm.286593

Similar proteinsi

Entry informationi

Entry nameiQ8R0K1_MOUSE
AccessioniPrimary (citable) accession number: Q8R0K1
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: April 25, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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