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Protein
Submitted name:

Smarca4 protein

Gene

Smarca4

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Smarca4 proteinImported
Gene namesi
Name:Smarca4Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:88192. Smarca4.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ8R0K1.
PeptideAtlasiQ8R0K1.
PRIDEiQ8R0K1.

Expressioni

Gene expression databases

BgeeiENSMUSG00000032187.

Interactioni

Protein-protein interaction databases

IntActiQ8R0K1. 1 interactor.
MINTiMINT-4118377.
STRINGi10090.ENSMUSP00000096547.

Structurei

3D structure databases

ProteinModelPortaliQ8R0K1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 67Helicase ATP-bindingInterPro annotationAdd BLAST67
Domaini220 – 382Helicase C-terminalInterPro annotationAdd BLAST163
Domaini579 – 649BromoInterPro annotationAdd BLAST71

Phylogenomic databases

eggNOGiKOG0386. Eukaryota.
COG0553. LUCA.
COG5076. LUCA.
HOVERGENiHBG056636.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
3.40.50.300. 2 hits.
InterProiIPR030100. BRG1.
IPR001487. Bromodomain.
IPR018359. Bromodomain_CS.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR029295. SnAC.
IPR000330. SNF2_N.
[Graphical view]
PANTHERiPTHR10799:SF76. PTHR10799:SF76. 2 hits.
PfamiPF00439. Bromodomain. 1 hit.
PF00271. Helicase_C. 1 hit.
PF14619. SnAC. 1 hit.
PF00176. SNF2_N. 1 hit.
[Graphical view]
PRINTSiPR00503. BROMODOMAIN.
SMARTiSM00297. BROMO. 1 hit.
SM00490. HELICc. 1 hit.
SM01314. SnAC. 1 hit.
[Graphical view]
SUPFAMiSSF47370. SSF47370. 1 hit.
SSF52540. SSF52540. 2 hits.
PROSITEiPS00633. BROMODOMAIN_1. 1 hit.
PS50014. BROMODOMAIN_2. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q8R0K1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
KDKHILAKIR WKYMIVDEGH RMKNHHCKLT QVLNTHYVAP RRLLLTGTPL
60 70 80 90 100
QNKLPELWAL LNFLLPTIFK SCSTFEQWFN APFAMTGEKV DLNEEETILI
110 120 130 140 150
IRRLHKVLRP FLLRRLKKEV EAQLPEKVEY VIKCDMSALQ RVLYRHMQAK
160 170 180 190 200
GVLLTDGSEK DKKGKGGTKT LMNTIMQLRK ICNHPYMFQH IEESFSEHLG
210 220 230 240 250
FTGGIVQGLD LYRASGKFEL LDRILPKLRA TNHKVLLFCQ MTSLMTIMED
260 270 280 290 300
YFAYRGFKYL RLDGTTKAED RGMLLKTFNE PGSEYFIFLL STRAGGLGLN
310 320 330 340 350
LQSADTVIIF DSDWNPHQDL QAQDRAHRIG QQNEVRVLRL CTVNSVEEKI
360 370 380 390 400
LAAAKYKLNV DQKVIQAGMF DQKSSSHERR AFLQAILEHE EQDEEEDEVP
410 420 430 440 450
DDETVNQMIA RHEEEFDLFM RMDLDRRREE ARNPKRKPRL MEEDELPSWI
460 470 480 490 500
IKDDAEVERL TCEEEEEKMF GRGSRHRKEV DYSDSLTEKQ WLKAIEEGTL
510 520 530 540 550
EEIEEEVRQK KSSRKRKRDS EAGSSTPTTS TRSRDKDEES KKQKKRGRPP
560 570 580 590 600
AEKLSPNPPN LTKKMKKIVD AVIKYKDSSG RQLSEVFIQL PSRKELPEYY
610 620 630 640 650
ELIRKPVDFK KIKERIRNHK YRSLNDLEKD VMLLCQNAQT FNLEGSLIYE
660 670 680 690 700
DSIVLQSVFT SVRQKIEKED DSEGEESEEE EEGEEEGSES ESRSVKVKIK
710 720 730 740
LGRKEKAQDR LKGGRRRPSR GSRAKPVVSD DDSEEEQEED RSGSGSEED
Length:749
Mass (Da):87,280
Last modified:June 1, 2002 - v1
Checksum:i1FB0CBB0561A55BA
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC026672 mRNA. Translation: AAH26672.1.
UniGeneiMm.286593.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC026672 mRNA. Translation: AAH26672.1.
UniGeneiMm.286593.

3D structure databases

ProteinModelPortaliQ8R0K1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ8R0K1. 1 interactor.
MINTiMINT-4118377.
STRINGi10090.ENSMUSP00000096547.

Proteomic databases

PaxDbiQ8R0K1.
PeptideAtlasiQ8R0K1.
PRIDEiQ8R0K1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:88192. Smarca4.

Phylogenomic databases

eggNOGiKOG0386. Eukaryota.
COG0553. LUCA.
COG5076. LUCA.
HOVERGENiHBG056636.

Miscellaneous databases

ChiTaRSiSmarca4. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000032187.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
3.40.50.300. 2 hits.
InterProiIPR030100. BRG1.
IPR001487. Bromodomain.
IPR018359. Bromodomain_CS.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR029295. SnAC.
IPR000330. SNF2_N.
[Graphical view]
PANTHERiPTHR10799:SF76. PTHR10799:SF76. 2 hits.
PfamiPF00439. Bromodomain. 1 hit.
PF00271. Helicase_C. 1 hit.
PF14619. SnAC. 1 hit.
PF00176. SNF2_N. 1 hit.
[Graphical view]
PRINTSiPR00503. BROMODOMAIN.
SMARTiSM00297. BROMO. 1 hit.
SM00490. HELICc. 1 hit.
SM01314. SnAC. 1 hit.
[Graphical view]
SUPFAMiSSF47370. SSF47370. 1 hit.
SSF52540. SSF52540. 2 hits.
PROSITEiPS00633. BROMODOMAIN_1. 1 hit.
PS50014. BROMODOMAIN_2. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8R0K1_MOUSE
AccessioniPrimary (citable) accession number: Q8R0K1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: October 5, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.