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Q8QVL3 (CAPSD_TTVF1) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Capsid protein
Gene names
ORF Names:ORF1
OrganismTorque teno felis virus (isolate Fc-TTV4) [Reference proteome]
Taxonomic identifier766188 [NCBI]
Taxonomic lineageVirusesssDNA virusesAnelloviridaeEtatorquevirus
Virus hostFelis catus (Cat) (Felis silvestris catus) [TaxID: 9685]

Protein attributes

Sequence length436 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Self-assembles to form an icosahedral capsid with a T=1 symmetry, about 30 nm in diameter, and consisting of 60 capsid proteins. The capsid encapsulates the genomic DNA. Capsid protein is involved in attachment and entry into the host cell By similarity.

Subcellular location

Virion Potential.

Sequence similarities

Belongs to the anellovirus capsid protein family.

Ontologies

Keywords
   Cellular componentCapsid protein
T=1 icosahedral capsid protein
Virion
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentT=1 icosahedral viral capsid

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 436436Capsid protein
PRO_0000404274

Regions

Compositional bias5 – 5652Arg-rich

Sequences

Sequence LengthMass (Da)Tools
Q8QVL3 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: 94F83E23BB09FD2F

FASTA43651,702
        10         20         30         40         50         60 
MYQSRRRRRR RWGRRILSRY KRKWGRRSRR GHGIYRRWRR WRRRPRTVVT EQHSRRVKTI 

        70         80         90        100        110        120 
IVRGWEPLGN ICPTDSARAK ATPYASYDSD SGQGQWHGTW GHHWFTFQSL VDRAEARLNS 

       130        140        150        160        170        180 
FSGNWESYDY LRFLGGTMYF MQPREMCFMF GNDPYLMTSD LDKTASQKNR AEETWITPGY 

       190        200        210        220        230        240 
LMHRPGTHLI LSRQKVERRS MYKIRVPVPT SWRGWFPIPD CFSYVLCHWY WTWWDPDACF 

       250        260        270        280        290        300 
FDPCATGSSC EAEPWWSTAQ TKQAWVDRTK LDDPPVGGTG PNQKTWAPFL PSRPCTNYYT 

       310        320        330        340        350        360 
HSASFWFKYK LKFQVTGENI WAPVPRDYSQ RGTVPTAPSR QQVESEARAP YPKTNRPPTT 

       370        380        390        400        410        420 
ADILPGDLDS DGILEDEAYE RITRDNPCPK RPRPLGIRWW DGTPGRTLQE QQQAAVLRPK 

       430 
PRRQLLRRLR DVLLQL 

« Hide

References

[1]"Genomic characterization of TT viruses (TTVs) in pigs, cats and dogs and their relatedness with species-specific TTVs in primates and tupaias."
Okamoto H., Takahashi M., Nishizawa T., Tawara A., Fukai K., Muramatsu U., Naito Y., Yoshikawa A.
J. Gen. Virol. 83:1291-1297(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB076003 Genomic DNA. Translation: BAB90854.1.
RefSeqYP_003587837.1. NC_014072.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID9086582.

Family and domain databases

InterProIPR004219. TTvirus_Unk.
[Graphical view]
PfamPF02956. TT_ORF1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCAPSD_TTVF1
AccessionPrimary (citable) accession number: Q8QVL3
Entry history
Integrated into UniProtKB/Swiss-Prot: February 8, 2011
Last sequence update: June 1, 2002
Last modified: April 3, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families