Reviewed, UniProtKB/Swiss-Prot Q8PZP6 (NADE_METMA)

Names and origin

Protein names

Recommended name:
    NH(3)-dependent NAD(+) synthetase
    EC=6.3.1.5

Gene names

Name:	nadE
Ordered Locus Names:	MM_0446

Organism

Methanosarcina mazei (Methanosarcina frisia) [Complete proteome] [HAMAP]

Taxonomic identifier

2209 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosarcinaceae › Methanosarcina

Protein attributes

Sequence length	256 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	ATP + deamido-NAD+ + NH3 = AMP + diphosphate + NAD+. HAMAP MF_00193
Pathway	Cofactor biosynthesis; NAD(+) biosynthesis; NAD(+) from deamido-NAD(+) (ammonia route): step 1/1. HAMAP MF_00193
Sequence similarities	Belongs to the NAD synthetase family.

Ontologies

Keywords
Ligand	ATP-binding NAD Nucleotide-binding
Molecular function	Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	NAD biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: HAMAP NAD+ synthase (glutamine-hydrolyzing) activity Inferred from electronic annotation. Source: InterPro NAD+ synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 256	256	NH(3)-dependent NAD(+) synthetase HAMAP MF_00193		PRO_0000152226
Regions
	Nucleotide binding	29 – 36	8	ATP By similarity
Sites
	Active site	31	1	By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q8PZP6-1 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: 679195AE15E1D9C9	FASTA	256	27,786
	10 20 30 40 50 60 MDLENAQNRI IDFIRDETGR AGVKGVVVGI SGGIDSALTA TLAVKALGKD RVLGIHMPES 70 80 90 100 110 120 SLTPAVDSED AEALADWLGI EYRTIDISGI ISAFMAAVPE SESADRLTKG NLKARTRMSL 130 140 150 160 170 180 LYFHANRLNR MVIGTGNKTE ILLGYYTKYG DGGVDLEPIG GLYKTGVWEL SSRLGIPESL 190 200 210 220 230 240 ITKKPSAGLW AGQTDEADLG ISYVKVDEVL KMIEDGVEPE VILDKTGISA DQLNSVTRRI 250 ERNEHKRKAP PVPELY

References

[1]

"The genome of Methanosarcina mazei: evidence for lateral gene transfer between Bacteria and Archaea." Deppenmeier U., Johann A., Hartsch T., Merkl R., Schmitz R.A., Martinez-Arias R., Henne A., Wiezer A., Baeumer S., Jacobi C., Brueggemann H., Lienard T., Christmann A., Boemecke M., Steckel S., Bhattacharyya A., Lykidis A., Overbeek R. , Klenk H.-P., Gunsalus R.P., Fritz H.-J., Gottschalk G. J. Mol. Microbiol. Biotechnol. 4:453-461(2002) [PubMed: 12125824] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11883 / OCM 88.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE008384 Genomic DNA. Translation: AAM30142.1.
RefSeq	NP_632470.1.
3D structure databases
HSSP	HSSP built from PDB template 1IFX based on UniProtKB P08164.
ModBase	Search...
Genome annotation databases
GeneID	1478788.
GenomeReviews	Gene locus MM_0446 in contig AE008384_GR.
KEGG	mma:MM_0446.
NMPDR	fig|192952.1.peg.446.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q8PZP6.
OMA	Q8PZP6. CAINPIG.
Enzyme and pathway databases
BioCyc	MMAZ192952:MM0446-MON.
BRENDA	6.3.1.5. 261165.
Family and domain databases
HAMAP	MF_00193. [Tree]
InterPro	IPR003694. NAD_synthase. IPR014729. Rossmann-like_a/b/a_fold. [Graphical view]
Gene3D	G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 1 hit.
Pfam	PF02540. NAD_synthase. 1 hit. [Graphical view]
TIGRFAMs	TIGR00552. nadE. 1 hit.
ProtoNet	Search...

Entry information

Entry name

NADE_METMA

Accession

Primary (citable) accession number: Q8PZP6

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 15, 2002
Last sequence update:	October 1, 2002
Last modified:	June 16, 2009
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)