Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Protein MM_0484

Gene

MM_0484

Organism
Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (Methanosarcina frisia)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciMMAZ192952:GCK2-501-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein MM_0484UniRule annotation
Gene namesi
Ordered Locus Names:MM_0484
OrganismiMethanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (Methanosarcina frisia)
Taxonomic identifieri192952 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
Proteomesi
  • UP000000595 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 199199Protein MM_0484PRO_0000142379Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi192952.MM_0484.

Structurei

Secondary structure

1
199
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi4 – 2421Combined sources
Helixi39 – 424Combined sources
Beta strandi47 – 537Combined sources
Beta strandi56 – 638Combined sources
Helixi70 – 8314Combined sources
Helixi93 – 986Combined sources
Beta strandi100 – 1067Combined sources
Turni116 – 1183Combined sources
Helixi119 – 1224Combined sources
Turni125 – 1273Combined sources
Beta strandi129 – 1346Combined sources
Beta strandi137 – 1415Combined sources
Helixi145 – 1484Combined sources
Helixi153 – 16311Combined sources
Helixi168 – 1714Combined sources
Turni172 – 1743Combined sources
Beta strandi176 – 1805Combined sources
Beta strandi182 – 1898Combined sources
Beta strandi194 – 1974Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1ZQ7X-ray2.11A/B/C/D1-199[»]
ProteinModelPortaliQ8PZK8.
SMRiQ8PZK8. Positions 1-199.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8PZK8.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini5 – 196192AMMECR1UniRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 AMMECR1 domain.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01336. Archaea.
COG2078. LUCA.
HOGENOMiHOG000223417.
KOiK09141.
OMAiTFLDHTC.

Family and domain databases

Gene3Di3.30.700.20. 1 hit.
HAMAPiMF_00645. AMMECR1.
InterProiIPR023473. AMMECR1.
IPR002733. AMMECR1_domain.
IPR027485. AMMECR1_N.
IPR027623. AmmeMemoSam_A.
IPR023472. Uncharacterised_MJ0810.
[Graphical view]
PANTHERiPTHR13016. PTHR13016. 1 hit.
PfamiPF01871. AMMECR1. 1 hit.
[Graphical view]
SUPFAMiSSF143447. SSF143447. 1 hit.
TIGRFAMsiTIGR04335. AmmeMemoSam_A. 1 hit.
TIGR00296. TIGR00296. 1 hit.
PROSITEiPS51112. AMMECR1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8PZK8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTETEGRAA VKLARKTIEI FLSKGKSPRP DASGVELSPV FEEYRGVFVT
60 70 80 90 100
LTEGGLLRGC IGHPYPDSTL KEAILDSAIS AATRDPRFPT VEQDEMKNIL
110 120 130 140 150
VEVTILTQPE KINASPKELP DKVEIGKHGL IVKQGYCQGL LLPQVAPEND
160 170 180 190
MDSIDFLSHT CMKAGLSPDA WVKGAEVYCF EGQIFKEKEP DGEVIEEKF
Length:199
Mass (Da):21,907
Last modified:October 1, 2002 - v1
Checksum:i0778DF76B6EC57F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008384 Genomic DNA. Translation: AAM30180.1.
RefSeqiWP_011032437.1. NC_003901.1.

Genome annotation databases

EnsemblBacteriaiAAM30180; AAM30180; MM_0484.
GeneIDi24880693.
KEGGimma:MM_0484.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008384 Genomic DNA. Translation: AAM30180.1.
RefSeqiWP_011032437.1. NC_003901.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1ZQ7X-ray2.11A/B/C/D1-199[»]
ProteinModelPortaliQ8PZK8.
SMRiQ8PZK8. Positions 1-199.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi192952.MM_0484.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM30180; AAM30180; MM_0484.
GeneIDi24880693.
KEGGimma:MM_0484.

Phylogenomic databases

eggNOGiarCOG01336. Archaea.
COG2078. LUCA.
HOGENOMiHOG000223417.
KOiK09141.
OMAiTFLDHTC.

Enzyme and pathway databases

BioCyciMMAZ192952:GCK2-501-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ8PZK8.

Family and domain databases

Gene3Di3.30.700.20. 1 hit.
HAMAPiMF_00645. AMMECR1.
InterProiIPR023473. AMMECR1.
IPR002733. AMMECR1_domain.
IPR027485. AMMECR1_N.
IPR027623. AmmeMemoSam_A.
IPR023472. Uncharacterised_MJ0810.
[Graphical view]
PANTHERiPTHR13016. PTHR13016. 1 hit.
PfamiPF01871. AMMECR1. 1 hit.
[Graphical view]
SUPFAMiSSF143447. SSF143447. 1 hit.
TIGRFAMsiTIGR04335. AmmeMemoSam_A. 1 hit.
TIGR00296. TIGR00296. 1 hit.
PROSITEiPS51112. AMMECR1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome of Methanosarcina mazei: evidence for lateral gene transfer between Bacteria and Archaea."
    Deppenmeier U., Johann A., Hartsch T., Merkl R., Schmitz R.A., Martinez-Arias R., Henne A., Wiezer A., Baeumer S., Jacobi C., Brueggemann H., Lienard T., Christmann A., Boemecke M., Steckel S., Bhattacharyya A., Lykidis A., Overbeek R.
    , Klenk H.-P., Gunsalus R.P., Fritz H.-J., Gottschalk G.
    J. Mol. Microbiol. Biotechnol. 4:453-461(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88.

Entry informationi

Entry nameiY484_METMA
AccessioniPrimary (citable) accession number: Q8PZK8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 10, 2003
Last sequence update: October 1, 2002
Last modified: November 11, 2015
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.