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Protein

30S ribosomal protein S24e

Gene

rps24e

Organism
Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (Methanosarcina frisia)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S24eUniRule annotation
Gene namesi
Name:rps24eUniRule annotation
Ordered Locus Names:MM_0599
OrganismiMethanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (Methanosarcina frisia)
Taxonomic identifieri192952 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
Proteomesi
  • UP000000595 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001376451 – 10130S ribosomal protein S24eAdd BLAST101

Interactioni

Protein-protein interaction databases

STRINGi192952.MM_0599.

Structurei

Secondary structure

1101
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi2 – 11Combined sources10
Turni12 – 15Combined sources4
Beta strandi16 – 24Combined sources9
Beta strandi26 – 28Combined sources3
Helixi32 – 42Combined sources11
Turni47 – 49Combined sources3
Beta strandi50 – 57Combined sources8
Beta strandi59 – 70Combined sources12
Helixi74 – 81Combined sources8
Helixi83 – 85Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1XN9NMR-A1-101[»]
ProteinModelPortaliQ8PZ95.
SMRiQ8PZ95.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8PZ95.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S24e family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04182. Archaea.
COG2004. LUCA.
HOGENOMiHOG000223076.
KOiK02974.
OMAiLHRTDVT.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
HAMAPiMF_00545. Ribosomal_S24e. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR001976. Ribosomal_S24e.
IPR018098. Ribosomal_S24e_CS.
[Graphical view]
PANTHERiPTHR10496. PTHR10496. 1 hit.
PfamiPF01282. Ribosomal_S24e. 1 hit.
[Graphical view]
ProDomiPD006052. Ribosomal_S24e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF54189. SSF54189. 1 hit.
PROSITEiPS00529. RIBOSOMAL_S24E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8PZ95-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDIKIIKDKK NPLLNRRELD FIVKYEGSTP SRNDVRNKLA AMLNAPLELL
60 70 80 90 100
VIQRIKTEYG MQESKGYAKL YEDADRMKQV EQEYVLKRNA VPGSETEGEE

A
Length:101
Mass (Da):11,674
Last modified:October 10, 2002 - v1
Checksum:i3823246BC2B2235D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008384 Genomic DNA. Translation: AAM30295.1.
RefSeqiWP_011032550.1. NC_003901.1.

Genome annotation databases

EnsemblBacteriaiAAM30295; AAM30295; MM_0599.
GeneIDi24876884.
KEGGimma:MM_0599.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008384 Genomic DNA. Translation: AAM30295.1.
RefSeqiWP_011032550.1. NC_003901.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1XN9NMR-A1-101[»]
ProteinModelPortaliQ8PZ95.
SMRiQ8PZ95.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi192952.MM_0599.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM30295; AAM30295; MM_0599.
GeneIDi24876884.
KEGGimma:MM_0599.

Phylogenomic databases

eggNOGiarCOG04182. Archaea.
COG2004. LUCA.
HOGENOMiHOG000223076.
KOiK02974.
OMAiLHRTDVT.

Miscellaneous databases

EvolutionaryTraceiQ8PZ95.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
HAMAPiMF_00545. Ribosomal_S24e. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR001976. Ribosomal_S24e.
IPR018098. Ribosomal_S24e_CS.
[Graphical view]
PANTHERiPTHR10496. PTHR10496. 1 hit.
PfamiPF01282. Ribosomal_S24e. 1 hit.
[Graphical view]
ProDomiPD006052. Ribosomal_S24e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF54189. SSF54189. 1 hit.
PROSITEiPS00529. RIBOSOMAL_S24E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS24_METMA
AccessioniPrimary (citable) accession number: Q8PZ95
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 10, 2002
Last sequence update: October 10, 2002
Last modified: November 2, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.