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Protein
Submitted name:

Type IV fimbriae assembly protein

Gene

pilZ

Organism
Xanthomonas axonopodis pv. citri (strain 306)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. cyclic-di-GMP binding Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciXAXO190486:GH55-1133-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Type IV fimbriae assembly proteinImported
Gene namesi
Name:pilZImported
Ordered Locus Names:XAC1133Imported
OrganismiXanthomonas axonopodis pv. citri (strain 306)Imported
Taxonomic identifieri190486 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000000576 Componenti: Chromosome

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
XAC2398Q8PJX94EBI-6419903,EBI-6419899

Protein-protein interaction databases

IntActiQ8PND9. 1 interaction.
STRINGi190486.XAC1133.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3CNRX-ray1.90A/B1-117[»]
4FOUX-ray2.10C/D1-117[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8PND9.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000290810.
KOiK02676.
OMAiGIGVQFS.
OrthoDBiEOG69SKDG.

Family and domain databases

InterProiIPR009875. PilZ_domain.
[Graphical view]
PfamiPF07238. PilZ. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8PND9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAMNARQGI LSLALKDKPA LYSAYMPFVK GGGIFVPTPK RYMLGDEVFL
60 70 80 90 100
LLTLPDSSER LPVAGKVIWT TPAGAQGNRA AGIGVQFPDG PEGEAVRNKI
110
ETLLAGLTTS DKPTHTM
Length:117
Mass (Da):12,430
Last modified:October 1, 2002 - v1
Checksum:iF7D088359A13555E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008923 Genomic DNA. Translation: AAM36006.1.
RefSeqiNP_641470.1. NC_003919.1.

Genome annotation databases

EnsemblBacteriaiAAM36006; AAM36006; XAC1133.
KEGGixac:XAC1133.
PATRICi24054213. VBIXanAxo33670_1189.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008923 Genomic DNA. Translation: AAM36006.1.
RefSeqiNP_641470.1. NC_003919.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3CNRX-ray1.90A/B1-117[»]
4FOUX-ray2.10C/D1-117[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ8PND9. 1 interaction.
STRINGi190486.XAC1133.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM36006; AAM36006; XAC1133.
KEGGixac:XAC1133.
PATRICi24054213. VBIXanAxo33670_1189.

Phylogenomic databases

HOGENOMiHOG000290810.
KOiK02676.
OMAiGIGVQFS.
OrthoDBiEOG69SKDG.

Enzyme and pathway databases

BioCyciXAXO190486:GH55-1133-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ8PND9.

Family and domain databases

InterProiIPR009875. PilZ_domain.
[Graphical view]
PfamiPF07238. PilZ. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Comparison of the genomes of two Xanthomonas pathogens with differing host specificities."
    da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P.
    , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P.
    Nature 417:459-463(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 306Imported.
  2. "PILZ protein structure and interactions with PILB and the FIMX EAL domain: implications for control of type IV pilus biogenesis."
    Guzzo C.R., Salinas R.K., Andrade M.O., Farah C.S.
    J. Mol. Biol. 393:848-866(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS).
  3. "Structure of the PilZ-FimXEAL-c-di-GMP Complex Responsible for the Regulation of Bacterial Type IV Pilus Biogenesis."
    Guzzo C.R., Dunger G., Salinas R.K., Farah C.S.
    J. Mol. Biol. 425:2174-2197(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS).

Entry informationi

Entry nameiQ8PND9_XANAC
AccessioniPrimary (citable) accession number: Q8PND9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: April 1, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.