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Protein
Submitted name:

Beta-galactosidase

Gene

bga

Organism
Xanthomonas axonopodis pv. citri (strain 306)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseSAAS annotation, Hydrolase

Protein family/group databases

CAZyiGH2. Glycoside Hydrolase Family 2.

Names & Taxonomyi

Protein namesi
Submitted name:
Beta-galactosidaseImported
Gene namesi
Name:bgaImported
Ordered Locus Names:XAC1308Imported
OrganismiXanthomonas axonopodis pv. citri (strain 306)Imported
Taxonomic identifieri190486 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
Proteomesi
  • UP000000576 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_500431194427 – 854Sequence analysisAdd BLAST828

Interactioni

Protein-protein interaction databases

STRINGi190486.XAC1308.

Structurei

3D structure databases

ProteinModelPortaliQ8PMW7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini100 – 248Glyco_hydro_2_NInterPro annotationAdd BLAST149
Domaini252 – 363Glyco_hydro_2InterPro annotationAdd BLAST112
Domaini372 – 532Glyco_hydro_2_CInterPro annotationAdd BLAST161
Domaini672 – 726DUF4982InterPro annotationAdd BLAST55

Sequence similaritiesi

Belongs to the glycosyl hydrolase 2 family.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105CNT. Bacteria.
COG3250. LUCA.
HOGENOMiHOG000022809.
KOiK01190.
OMAiHGYKPLG.
OrthoDBiPOG091H07QB.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
2.60.40.320. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR032311. DUF4982.
IPR008979. Galactose-bd-like.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006103. Glyco_hydro_2_cat.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF16355. DUF4982. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSiPR00132. GLHYDRLASE2.
SUPFAMiSSF49303. SSF49303. 1 hit.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8PMW7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGINRRELL RGMLASGVSA ALPVGAAGTV ASAGATAAPA AKNSVSTSAL
60 70 80 90 100
GDAALAPRER LLFDFGWRFH LGHGSDAARD FEFGTFQRTF AKAGKDTATA
110 120 130 140 150
AQLAFDDSAW QQVDLPHDWA VGLPFRQEPI SASITEEDPA AAHGYKPLGT
160 170 180 190 200
SFPENSVGWY RRTLQIPASD LGKRISLVFD GVFRECIVFC NGHIVGRNAS
210 220 230 240 250
GYCGFEVDLS DVLDYGKPNI IAIRVDATLG EGWFYEGAGI YRHVWLQKTD
260 270 280 290 300
PVHIPQDGVF VRSTVQDGNA TAQLSTEVRN EGSAPRRCVV QARITAPDGR
310 320 330 340 350
TVAQASSAVA TVAPGQVQVV EQTLPLGQAV LWSIDAPQLY HLTTSVHSDG
360 370 380 390 400
TAVDALVTPF GVRSIAFDAQ RGFLLNGAPL KLHGTNNHQD HAGVGTAIPD
410 420 430 440 450
ALHAWRLRQL KSMGCNAYRS SHNPATPELL ALCDRLGMLV IEETRRMSTD
460 470 480 490 500
PEAMGELETM VRRGRNHPSV ILWSLGNEEP QQVTARGARI VTRMQQRVRQ
510 520 530 540 550
LDPTRPTTFA MDKGFGDGVG QVVDVVGFNY RTSQMDGFHA QYPNIPIYGS
560 570 580 590 600
ETGSTVSVRG NYRRDDQRGY TRAYDLDHPW WASTAEAWWS YVAQRPYIAG
610 620 630 640 650
GFIWTGFDYR GEPTPYNRWP NVASQFGVLD SCGFPKDNYW YYRAQWTSEP
660 670 680 690 700
VLHLFPHWNW DGLLEPDDNG RIAVWCHSNL EAVELLVNGV SQGLQQVPAY
710 720 730 740 750
GHVEWRVVYA PGTIEARGYR GGKLVLSERR ETTGNPAAIR LSCDRNTLRA
760 770 780 790 800
DAEDVAVVKV EILDAQGRLV PTADSLVQFA LRGPARLIGV GNGDPSSHED
810 820 830 840 850
DKAPRRKAFN GLCAALLQTT RSSGEIVLQA TAPGLTSSTL RLPAEPTRSR

ASVA
Length:854
Mass (Da):93,156
Last modified:October 1, 2002 - v1
Checksum:i48C4C3BF24EE1686
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008923 Genomic DNA. Translation: AAM36179.1.
RefSeqiWP_011050834.1. NC_003919.1.

Genome annotation databases

EnsemblBacteriaiAAM36179; AAM36179; XAC1308.
GeneIDi14852068.
KEGGixac:XAC1308.
PATRICi24054605. VBIXanAxo33670_1383.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008923 Genomic DNA. Translation: AAM36179.1.
RefSeqiWP_011050834.1. NC_003919.1.

3D structure databases

ProteinModelPortaliQ8PMW7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi190486.XAC1308.

Protein family/group databases

CAZyiGH2. Glycoside Hydrolase Family 2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM36179; AAM36179; XAC1308.
GeneIDi14852068.
KEGGixac:XAC1308.
PATRICi24054605. VBIXanAxo33670_1383.

Phylogenomic databases

eggNOGiENOG4105CNT. Bacteria.
COG3250. LUCA.
HOGENOMiHOG000022809.
KOiK01190.
OMAiHGYKPLG.
OrthoDBiPOG091H07QB.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
2.60.40.320. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR032311. DUF4982.
IPR008979. Galactose-bd-like.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006103. Glyco_hydro_2_cat.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF16355. DUF4982. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSiPR00132. GLHYDRLASE2.
SUPFAMiSSF49303. SSF49303. 1 hit.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8PMW7_XANAC
AccessioniPrimary (citable) accession number: Q8PMW7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: November 2, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.