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Protein

Outer membrane protein assembly factor BamE

Gene

smpA

Organism
Xanthomonas axonopodis pv. citri (strain 306)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.UniRule annotation

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Outer membrane protein assembly factor BamEUniRule annotation
Gene namesi
Name:smpAImported
Synonyms:bamEUniRule annotation
Ordered Locus Names:XAC1516Imported
OrganismiXanthomonas axonopodis pv. citri (strain 306)Imported
Taxonomic identifieri190486 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
Proteomesi
  • UP000000576 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation; Lipid-anchor UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell outer membraneUniRule annotation, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 16UniRule annotationAdd BLAST16
ChainiPRO_500507888017 – 131Outer membrane protein assembly factor BamEUniRule annotationAdd BLAST115

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi17N-palmitoyl cysteineUniRule annotation1
Lipidationi17S-diacylglycerol cysteineUniRule annotation1

Keywords - PTMi

Lipoprotein, PalmitateUniRule annotation

Interactioni

Subunit structurei

Part of the Bam complex.UniRule annotation

Protein-protein interaction databases

STRINGi190486.XAC1516.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2PXGNMR-A15-131[»]
ProteinModelPortaliQ8PMB6.
SMRiQ8PMB6.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8PMB6.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini28 – 98SmpA_OmlAInterPro annotationAdd BLAST71

Sequence similaritiesi

Belongs to the BamE family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

eggNOGiENOG4105YRI. Bacteria.
COG2913. LUCA.
HOGENOMiHOG000256181.
KOiK06186.
OMAiHYPSRFA.
OrthoDBiPOG091H066X.

Family and domain databases

HAMAPiMF_00925. OM_assembly_BamE. 1 hit.
InterProiIPR026592. BamE.
IPR007450. Lipoprotein_SmpA/OmlA.
[Graphical view]
PfamiPF04355. SmpA_OmlA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8PMB6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRNLLLVAAV ALSTAGCGII YKQPIYQGNL IKQNAVEQLQ VGQSKQQVSA
60 70 80 90 100
LLGTPSIPDP FHAQRWDYTS TQRVDRLART EIKNFTVFFE NEQVVRWEGD
110 120 130
YFPSQDEQLA KAAPKQFGRN LARDKKKQRG R
Length:131
Mass (Da):14,922
Last modified:October 1, 2002 - v1
Checksum:iCAF4B2C1B40CDCFE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008923 Genomic DNA. Translation: AAM36385.1.
RefSeqiWP_003483624.1. NC_003919.1.

Genome annotation databases

EnsemblBacteriaiAAM36385; AAM36385; XAC1516.
GeneIDi14852271.
KEGGixac:XAC1516.
PATRICi24055025. VBIXanAxo33670_1592.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008923 Genomic DNA. Translation: AAM36385.1.
RefSeqiWP_003483624.1. NC_003919.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2PXGNMR-A15-131[»]
ProteinModelPortaliQ8PMB6.
SMRiQ8PMB6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi190486.XAC1516.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM36385; AAM36385; XAC1516.
GeneIDi14852271.
KEGGixac:XAC1516.
PATRICi24055025. VBIXanAxo33670_1592.

Phylogenomic databases

eggNOGiENOG4105YRI. Bacteria.
COG2913. LUCA.
HOGENOMiHOG000256181.
KOiK06186.
OMAiHYPSRFA.
OrthoDBiPOG091H066X.

Miscellaneous databases

EvolutionaryTraceiQ8PMB6.

Family and domain databases

HAMAPiMF_00925. OM_assembly_BamE. 1 hit.
InterProiIPR026592. BamE.
IPR007450. Lipoprotein_SmpA/OmlA.
[Graphical view]
PfamiPF04355. SmpA_OmlA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8PMB6_XANAC
AccessioniPrimary (citable) accession number: Q8PMB6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: November 2, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.