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Protein

UvrABC system protein C

Gene

uvrC

Organism
Xanthomonas axonopodis pv. citri (strain 306)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionExcision nuclease
Biological processDNA damage, DNA excision, DNA repair, SOS response

Names & Taxonomyi

Protein namesi
Recommended name:
UvrABC system protein CUniRule annotation
Short name:
Protein UvrCUniRule annotation
Alternative name(s):
Excinuclease ABC subunit CUniRule annotation
Gene namesi
Name:uvrCUniRule annotation
Ordered Locus Names:XAC2092
OrganismiXanthomonas axonopodis pv. citri (strain 306)
Taxonomic identifieri190486 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
Proteomesi
  • UP000000576 Componenti: Chromosome

Subcellular locationi

Q8PKS0:
  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002649771 – 619UvrABC system protein CAdd BLAST619

Interactioni

Subunit structurei

Interacts with UvrB in an incision complex.UniRule annotation

Protein-protein interaction databases

STRINGi190486.XAC2092.

Structurei

3D structure databases

ProteinModelPortaliQ8PKS0.
SMRiQ8PKS0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 98GIY-YIGUniRule annotationAdd BLAST79
Domaini207 – 242UVRUniRule annotationAdd BLAST36

Sequence similaritiesi

Belongs to the UvrC family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CII. Bacteria.
COG0322. LUCA.
HOGENOMiHOG000279961.
KOiK03703.
OMAiLFPIRQC.
OrthoDBiPOG091H01BS.

Family and domain databases

Gene3Di3.40.1440.10. 1 hit.
4.10.860.10. 1 hit.
HAMAPiMF_00203. UvrC. 1 hit.
InterProiView protein in InterPro
IPR000305. GIY-YIG_endonuc.
IPR035901. GIY-YIG_endonuc_sf.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR010994. RuvA_2-like.
IPR001943. UVR_dom.
IPR036876. UVR_dom_sf.
IPR004791. UvrC.
IPR001162. UvrC_homol_region.
PfamiView protein in Pfam
PF01541. GIY-YIG. 1 hit.
PF02151. UVR. 1 hit.
PF08459. UvrC_HhH_N. 1 hit.
SMARTiView protein in SMART
SM00465. GIYc. 1 hit.
SM00278. HhH1. 2 hits.
SUPFAMiSSF46600. SSF46600. 1 hit.
SSF47781. SSF47781. 1 hit.
SSF82771. SSF82771. 1 hit.
TIGRFAMsiTIGR00194. uvrC. 1 hit.
PROSITEiView protein in PROSITE
PS50164. GIY_YIG. 1 hit.
PS50151. UVR. 1 hit.
PS50165. UVRC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8PKS0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVRPQNDFD GKAFAAQLST APGVYRMYAG DDTLLYVGKA GALRKRVGSY
60 70 80 90 100
FNGTPKNARL TSMLSQVARM DVTVTRSEAE ALLLENQLIK SLSPRYNVSL
110 120 130 140 150
RDDKSYPYVL LTREQWPRIA LHRGPRAVQG RYFGPYTGVT GVRETLSLMH
160 170 180 190 200
KLFKLRSCED SVFRNRSRPC LQYQIGRCSG PCVDLVAAPD YAESVRRATM
210 220 230 240 250
FLEGKSDQLG EEIMHSMQQA SEALEFERAA RLRDLLSSLR SMQNRQYVDG
260 270 280 290 300
RAADLDVLAC ATQSSQACVL LLSFRDGRNL GTRSFFPKTN GEDSADEILG
310 320 330 340 350
AFVSQYYAEH SPPREILLDR EIPEAELIEA ALSTAAEHKV ALKWNVRGER
360 370 380 390 400
AGYLLLATRN AQLTLVTELT SQSAQHARSE ALRELLGLAE PVKRVECFDI
410 420 430 440 450
SHTMGEATVA SCVVFDASGP VRGQYRRFNI SGITPGDDYA AMRQAIERRF
460 470 480 490 500
RRAVEENGVI PDVLLIDGGA GQLAQAQAAL ADLGVENVLL VGVAKGEERR
510 520 530 540 550
AGHEALIMAD GRELRPGAAS PALQFIQQVR DEAHRFAITG HRGRRQKARM
560 570 580 590 600
TSKLEDIPGI GPRRRASLLK HFGGLVGLKA AGEAEIARVE GVNAALAARI
610
YANLHGLALP DAAGEASPQ
Length:619
Mass (Da):67,879
Last modified:October 1, 2002 - v1
Checksum:iDAC71196AE57A820
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008923 Genomic DNA. Translation: AAM36949.1.
RefSeqiWP_005923353.1. NC_003919.1.

Genome annotation databases

EnsemblBacteriaiAAM36949; AAM36949; XAC2092.
KEGGixac:XAC2092.

Similar proteinsi

Entry informationi

Entry nameiUVRC_XANAC
AccessioniPrimary (citable) accession number: Q8PKS0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: October 1, 2002
Last modified: October 25, 2017
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families