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Q8PJX9 (Q8PJX9_XANAC) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 88. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length689 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Binary interactions

With

Entry

#Exp.

IntAct

Notes

pilZQ8PND94EBI-6419899,EBI-6419903

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding480 – 4812Cyclic diguanosine monophosphate PDB 4FOJ PDB 4FOK PDB 4FOU
Nucleotide binding490 – 4912Cyclic diguanosine monophosphate PDB 4FOJ PDB 4FOK PDB 4FOU
Nucleotide binding653 – 6542Cyclic diguanosine monophosphate PDB 4FOJ PDB 4FOK PDB 4FOU

Sites

Metal binding5021Calcium PDB 4FOU
Metal binding5061Calcium PDB 4FOU
Binding site4631Cyclic diguanosine monophosphate PDB 4FOJ PDB 4FOK PDB 4FOU
Binding site5081Cyclic diguanosine monophosphate PDB 4FOJ PDB 4FOK PDB 4FOU
Binding site5341Cyclic diguanosine monophosphate PDB 4FOJ PDB 4FOK PDB 4FOU

Sequences

Sequence LengthMass (Da)Tools
Q8PJX9 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 9477086E930FCC4A

FASTA68976,015
        10         20         30         40         50         60 
MQKGKDLTLR LMIVDDSVES AETIVTALRN GGIAVRPSRP QSQEELASML SGQIDLAILG 

        70         80         90        100        110        120 
QAQQIPMSAL QTQIAGSGKD IPILLLAERI EENALVEAAS HGVRAIALRH RPAHLLALVR 

       130        140        150        160        170        180 
SEWDDLQARR GLRRIEAQMR ETERRCDALI ASSRDPIAYV HEGMHIRAND AYLEMFGFES 

       190        200        210        220        230        240 
FDDVEGISLL DMIAAQYVDD FKQLLKAMSK GEPPPAQYKL DARRVEGDTF PATMEFATAT 

       250        260        270        280        290        300 
YEGEPCIQVV FRRREEFDPE LAREVEDLRQ RDQVTGLLNR PTFMVALEQA VAQAGRSEGQ 

       310        320        330        340        350        360 
SGFLLIEPDH YARILPEFGL DSADALIAAL AAHVASVLDD SVLAARFGEH SFALLLNGNY 

       370        380        390        400        410        420 
ARTHALAETV RNAFAQHVFS VGTRSATVTV SIGGVQIGEK IASIGQVLNR GTEAVRTTAE 

       430        440        450        460        470        480 
LGGNAVSIYD PAAADRAEEE RIERWVEQLR EALVGDGFLL HYQPVLNLQG EPLELYQAFL 

       490        500        510        520        530        540 
RLERNGEMMS PNAFMAIAEE HDLVTEIDRW VVARAIRQLG ERQRAGHKTH LLVRIGPNSF 

       550        560        570        580        590        600 
SDPQMIDTIR EQLAVYGVPG ERLWLQTPES KVFTHLRNAQ QFLAAVSAMD CKVGLEQFGS 

       610        620        630        640        650        660 
GLDSFQLLAH FHPAFLKLDR GITGDIASAR DSQEKIREIT SRAQPAGILT MAEFVADAQS 

       670        680 
MSSFFSAGVD YVQGDFVAPT GPLMNYEFG 

« Hide

References

« Hide 'large scale' references
[1]"Comparison of the genomes of two Xanthomonas pathogens with differing host specificities."
da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P. expand/collapse author list , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P.
Nature 417:459-463(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 306 EMBL AAM37250.1.
[2]"Structure of the PilZ-FimXEAL-c-di-GMP Complex Responsible for the Regulation of Bacterial Type IV Pilus Biogenesis."
Guzzo C.R., Dunger G., Salinas R.K., Farah C.S.
J. Mol. Biol. 425:2174-2197(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.55 ANGSTROMS) OF 426-689 IN COMPLEX WITH CALCIUM AND CYCLIC DIGUANOSINE MONOPHOSPHATE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE008923 Genomic DNA. Translation: AAM37250.1.
RefSeqNP_642714.1. NC_003919.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4FOJX-ray1.55A426-689[»]
4FOKX-ray1.80A426-689[»]
4FOUX-ray2.10A/B426-689[»]
ProteinModelPortalQ8PJX9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ8PJX9. 2 interactions.
STRING190486.XAC2398.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM37250; AAM37250; XAC2398.
GeneID1156469.
KEGGxac:XAC2398.
PATRIC24056868. VBIXanAxo33670_2496.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000225944.
OMAVTEIDRW.
OrthoDBEOG69GZGV.
ProtClustDBCLSK869015.

Enzyme and pathway databases

BioCycXAXO190486:GH55-2398-MONOMER.

Family and domain databases

Gene3D3.20.20.450. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR011006. CheY-like_superfamily.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR000160. GGDEF_dom.
IPR000014. PAS.
[Graphical view]
PfamPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTSM00052. EAL. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
SSF52172. SSF52172. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8PJX9_XANAC
AccessionPrimary (citable) accession number: Q8PJX9
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: February 19, 2014
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)