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Q8PJX9

- Q8PJX9_XANAC

UniProt

Q8PJX9 - Q8PJX9_XANAC

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Protein
Submitted name: Uncharacterized protein
Gene
XAC2398
Organism
Xanthomonas axonopodis pv. citri (strain 306)
Status
Unreviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei463 – 4631Cyclic diguanosine monophosphateImported
Metal bindingi502 – 5021CalciumImported
Metal bindingi506 – 5061CalciumImported
Binding sitei508 – 5081Cyclic diguanosine monophosphateImported
Binding sitei534 – 5341Cyclic diguanosine monophosphateImported

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi480 – 4812Cyclic diguanosine monophosphateImported
Nucleotide bindingi490 – 4912Cyclic diguanosine monophosphateImported
Nucleotide bindingi653 – 6542Cyclic diguanosine monophosphateImported

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. nucleotide binding Source: UniProtKB-KW
  3. phosphorus-oxygen lyase activity Source: InterPro
  4. protein binding Source: IntAct
  5. signal transducer activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. cyclic nucleotide biosynthetic process Source: InterPro
  2. intracellular signal transduction Source: InterPro
Complete GO annotation...

Keywords - Ligandi

CalciumImported, Metal-bindingImported, Nucleotide-bindingImported

Enzyme and pathway databases

BioCyciXAXO190486:GH55-2398-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:XAC2398Imported
OrganismiXanthomonas axonopodis pv. citri (strain 306)Imported
Taxonomic identifieri190486 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000000576: Chromosome

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
pilZQ8PND94EBI-6419899,EBI-6419903

Protein-protein interaction databases

IntActiQ8PJX9. 2 interactions.
STRINGi190486.XAC2398.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4FOJX-ray1.55A426-689[»]
4FOKX-ray1.80A426-689[»]
4FOUX-ray2.10A/B426-689[»]
ProteinModelPortaliQ8PJX9.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000225944.
OMAiWVILEAI.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001054. A/G_cyclase.
IPR011006. CheY-like_superfamily.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR000160. GGDEF_dom.
IPR000014. PAS.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF52172. SSF52172. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8PJX9-1 [UniParc]FASTAAdd to Basket

« Hide

MQKGKDLTLR LMIVDDSVES AETIVTALRN GGIAVRPSRP QSQEELASML    50
SGQIDLAILG QAQQIPMSAL QTQIAGSGKD IPILLLAERI EENALVEAAS 100
HGVRAIALRH RPAHLLALVR SEWDDLQARR GLRRIEAQMR ETERRCDALI 150
ASSRDPIAYV HEGMHIRAND AYLEMFGFES FDDVEGISLL DMIAAQYVDD 200
FKQLLKAMSK GEPPPAQYKL DARRVEGDTF PATMEFATAT YEGEPCIQVV 250
FRRREEFDPE LAREVEDLRQ RDQVTGLLNR PTFMVALEQA VAQAGRSEGQ 300
SGFLLIEPDH YARILPEFGL DSADALIAAL AAHVASVLDD SVLAARFGEH 350
SFALLLNGNY ARTHALAETV RNAFAQHVFS VGTRSATVTV SIGGVQIGEK 400
IASIGQVLNR GTEAVRTTAE LGGNAVSIYD PAAADRAEEE RIERWVEQLR 450
EALVGDGFLL HYQPVLNLQG EPLELYQAFL RLERNGEMMS PNAFMAIAEE 500
HDLVTEIDRW VVARAIRQLG ERQRAGHKTH LLVRIGPNSF SDPQMIDTIR 550
EQLAVYGVPG ERLWLQTPES KVFTHLRNAQ QFLAAVSAMD CKVGLEQFGS 600
GLDSFQLLAH FHPAFLKLDR GITGDIASAR DSQEKIREIT SRAQPAGILT 650
MAEFVADAQS MSSFFSAGVD YVQGDFVAPT GPLMNYEFG 689
Length:689
Mass (Da):76,015
Last modified:October 1, 2002 - v1
Checksum:i9477086E930FCC4A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE008923 Genomic DNA. Translation: AAM37250.1.
RefSeqiNP_642714.1. NC_003919.1.

Genome annotation databases

EnsemblBacteriaiAAM37250; AAM37250; XAC2398.
GeneIDi1156469.
KEGGixac:XAC2398.
PATRICi24056868. VBIXanAxo33670_2496.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE008923 Genomic DNA. Translation: AAM37250.1 .
RefSeqi NP_642714.1. NC_003919.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4FOJ X-ray 1.55 A 426-689 [» ]
4FOK X-ray 1.80 A 426-689 [» ]
4FOU X-ray 2.10 A/B 426-689 [» ]
ProteinModelPortali Q8PJX9.
ModBasei Search...

Protein-protein interaction databases

IntActi Q8PJX9. 2 interactions.
STRINGi 190486.XAC2398.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAM37250 ; AAM37250 ; XAC2398 .
GeneIDi 1156469.
KEGGi xac:XAC2398.
PATRICi 24056868. VBIXanAxo33670_2496.

Phylogenomic databases

HOGENOMi HOG000225944.
OMAi WVILEAI.
OrthoDBi EOG69GZGV.

Enzyme and pathway databases

BioCyci XAXO190486:GH55-2398-MONOMER.

Family and domain databases

Gene3Di 3.20.20.450. 1 hit.
InterProi IPR001054. A/G_cyclase.
IPR011006. CheY-like_superfamily.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR000160. GGDEF_dom.
IPR000014. PAS.
[Graphical view ]
Pfami PF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view ]
SMARTi SM00052. EAL. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view ]
SUPFAMi SSF141868. SSF141868. 1 hit.
SSF52172. SSF52172. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsi TIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEi PS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Comparison of the genomes of two Xanthomonas pathogens with differing host specificities."
    da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F.Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P.
    , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P.Jr., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A.Jr., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P.
    Nature 417:459-463(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 306Imported.
  2. "Structure of the PilZ-FimXEAL-c-di-GMP Complex Responsible for the Regulation of Bacterial Type IV Pilus Biogenesis."
    Guzzo C.R., Dunger G., Salinas R.K., Farah C.S.
    J. Mol. Biol. 425:2174-2197(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.55 ANGSTROMS) OF 426-689 IN COMPLEX WITH CALCIUM AND CYCLIC DIGUANOSINE MONOPHOSPHATE.

Entry informationi

Entry nameiQ8PJX9_XANAC
AccessioniPrimary (citable) accession number: Q8PJX9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: July 9, 2014
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome

External Data

Dasty 3

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