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Q8PJX9

- Q8PJX9_XANAC

UniProt

Q8PJX9 - Q8PJX9_XANAC

Protein
Submitted name:

Uncharacterized protein

Gene

XAC2398

Organism
Xanthomonas axonopodis pv. citri (strain 306)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 92 (01 Oct 2014)
      Sequence version 1 (01 Oct 2002)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei463 – 4631Cyclicdiguanosine monophosphateImported
    Metal bindingi502 – 5021Calcium
    Metal bindingi506 – 5061Calcium
    Binding sitei508 – 5081Cyclicdiguanosine monophosphateImported
    Binding sitei534 – 5341Cyclicdiguanosine monophosphateImported

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi480 – 4812Cyclicdiguanosine monophosphateImported
    Nucleotide bindingi490 – 4912Cyclicdiguanosine monophosphateImported
    Nucleotide bindingi653 – 6542Cyclicdiguanosine monophosphateImported

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. nucleotide binding Source: UniProtKB-KW
    3. phosphorus-oxygen lyase activity Source: InterPro
    4. protein binding Source: IntAct
    5. signal transducer activity Source: InterPro

    GO - Biological processi

    1. cyclic nucleotide biosynthetic process Source: InterPro
    2. intracellular signal transduction Source: InterPro

    Keywords - Ligandi

    CalciumImported, Metal-bindingImported, Nucleotide-bindingImported

    Enzyme and pathway databases

    BioCyciXAXO190486:GH55-2398-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:XAC2398Imported
    OrganismiXanthomonas axonopodis pv. citri (strain 306)Imported
    Taxonomic identifieri190486 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
    ProteomesiUP000000576: Chromosome

    Interactioni

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    pilZQ8PND94EBI-6419899,EBI-6419903

    Protein-protein interaction databases

    IntActiQ8PJX9. 2 interactions.
    STRINGi190486.XAC2398.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4FOJX-ray1.55A426-689[»]
    4FOKX-ray1.80A426-689[»]
    4FOUX-ray2.10A/B426-689[»]
    ProteinModelPortaliQ8PJX9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000225944.
    OMAiWVILEAI.
    OrthoDBiEOG69GZGV.

    Family and domain databases

    Gene3Di3.20.20.450. 1 hit.
    InterProiIPR001054. A/G_cyclase.
    IPR011006. CheY-like_superfamily.
    IPR001633. Diguanylate_PEstase_EAL_dom.
    IPR000160. GGDEF_dom.
    IPR000014. PAS.
    [Graphical view]
    PfamiPF00563. EAL. 1 hit.
    PF00990. GGDEF. 1 hit.
    [Graphical view]
    SMARTiSM00052. EAL. 1 hit.
    SM00091. PAS. 1 hit.
    [Graphical view]
    SUPFAMiSSF141868. SSF141868. 1 hit.
    SSF52172. SSF52172. 1 hit.
    SSF55073. SSF55073. 1 hit.
    SSF55785. SSF55785. 1 hit.
    TIGRFAMsiTIGR00254. GGDEF. 1 hit.
    TIGR00229. sensory_box. 1 hit.
    PROSITEiPS50883. EAL. 1 hit.
    PS50887. GGDEF. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q8PJX9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQKGKDLTLR LMIVDDSVES AETIVTALRN GGIAVRPSRP QSQEELASML    50
    SGQIDLAILG QAQQIPMSAL QTQIAGSGKD IPILLLAERI EENALVEAAS 100
    HGVRAIALRH RPAHLLALVR SEWDDLQARR GLRRIEAQMR ETERRCDALI 150
    ASSRDPIAYV HEGMHIRAND AYLEMFGFES FDDVEGISLL DMIAAQYVDD 200
    FKQLLKAMSK GEPPPAQYKL DARRVEGDTF PATMEFATAT YEGEPCIQVV 250
    FRRREEFDPE LAREVEDLRQ RDQVTGLLNR PTFMVALEQA VAQAGRSEGQ 300
    SGFLLIEPDH YARILPEFGL DSADALIAAL AAHVASVLDD SVLAARFGEH 350
    SFALLLNGNY ARTHALAETV RNAFAQHVFS VGTRSATVTV SIGGVQIGEK 400
    IASIGQVLNR GTEAVRTTAE LGGNAVSIYD PAAADRAEEE RIERWVEQLR 450
    EALVGDGFLL HYQPVLNLQG EPLELYQAFL RLERNGEMMS PNAFMAIAEE 500
    HDLVTEIDRW VVARAIRQLG ERQRAGHKTH LLVRIGPNSF SDPQMIDTIR 550
    EQLAVYGVPG ERLWLQTPES KVFTHLRNAQ QFLAAVSAMD CKVGLEQFGS 600
    GLDSFQLLAH FHPAFLKLDR GITGDIASAR DSQEKIREIT SRAQPAGILT 650
    MAEFVADAQS MSSFFSAGVD YVQGDFVAPT GPLMNYEFG 689
    Length:689
    Mass (Da):76,015
    Last modified:October 1, 2002 - v1
    Checksum:i9477086E930FCC4A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE008923 Genomic DNA. Translation: AAM37250.1.
    RefSeqiNP_642714.1. NC_003919.1.

    Genome annotation databases

    EnsemblBacteriaiAAM37250; AAM37250; XAC2398.
    GeneIDi1156469.
    KEGGixac:XAC2398.
    PATRICi24056868. VBIXanAxo33670_2496.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE008923 Genomic DNA. Translation: AAM37250.1 .
    RefSeqi NP_642714.1. NC_003919.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4FOJ X-ray 1.55 A 426-689 [» ]
    4FOK X-ray 1.80 A 426-689 [» ]
    4FOU X-ray 2.10 A/B 426-689 [» ]
    ProteinModelPortali Q8PJX9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q8PJX9. 2 interactions.
    STRINGi 190486.XAC2398.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAM37250 ; AAM37250 ; XAC2398 .
    GeneIDi 1156469.
    KEGGi xac:XAC2398.
    PATRICi 24056868. VBIXanAxo33670_2496.

    Phylogenomic databases

    HOGENOMi HOG000225944.
    OMAi WVILEAI.
    OrthoDBi EOG69GZGV.

    Enzyme and pathway databases

    BioCyci XAXO190486:GH55-2398-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.450. 1 hit.
    InterProi IPR001054. A/G_cyclase.
    IPR011006. CheY-like_superfamily.
    IPR001633. Diguanylate_PEstase_EAL_dom.
    IPR000160. GGDEF_dom.
    IPR000014. PAS.
    [Graphical view ]
    Pfami PF00563. EAL. 1 hit.
    PF00990. GGDEF. 1 hit.
    [Graphical view ]
    SMARTi SM00052. EAL. 1 hit.
    SM00091. PAS. 1 hit.
    [Graphical view ]
    SUPFAMi SSF141868. SSF141868. 1 hit.
    SSF52172. SSF52172. 1 hit.
    SSF55073. SSF55073. 1 hit.
    SSF55785. SSF55785. 1 hit.
    TIGRFAMsi TIGR00254. GGDEF. 1 hit.
    TIGR00229. sensory_box. 1 hit.
    PROSITEi PS50883. EAL. 1 hit.
    PS50887. GGDEF. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparison of the genomes of two Xanthomonas pathogens with differing host specificities."
      da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P.
      , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P.
      Nature 417:459-463(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 306Imported.
    2. "Structure of the PilZ-FimXEAL-c-di-GMP Complex Responsible for the Regulation of Bacterial Type IV Pilus Biogenesis."
      Guzzo C.R., Dunger G., Salinas R.K., Farah C.S.
      J. Mol. Biol. 425:2174-2197(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.55 ANGSTROMS) OF 426-689 IN COMPLEX WITH CALCIUM AND CYCLICDIGUANOSINE MONOPHOSPHATE.

    Entry informationi

    Entry nameiQ8PJX9_XANAC
    AccessioniPrimary (citable) accession number: Q8PJX9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2002
    Last sequence update: October 1, 2002
    Last modified: October 1, 2014
    This is version 92 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteomeImported

    External Data

    Dasty 3