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Protein
Submitted name:

Beta-mannosidase

Gene

XAC3075

Organism
Xanthomonas axonopodis pv. citri (strain 306)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciXAXO190486:GH55-3075-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Beta-mannosidaseImported
Gene namesi
Ordered Locus Names:XAC3075Imported
OrganismiXanthomonas axonopodis pv. citri (strain 306)Imported
Taxonomic identifieri190486 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
Proteomesi
  • UP000000576 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2828Sequence analysisAdd
BLAST
Chaini29 – 896868Sequence analysisPRO_5004312008Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi190486.XAC3075.

Structurei

3D structure databases

ProteinModelPortaliQ8PI23.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini237 – 346110Glyco_hydro_2InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105D6I. Bacteria.
COG3250. LUCA.
HOGENOMiHOG000186861.
KOiK01192.
OMAiALATNWF.
OrthoDBiEOG6VHZ94.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
2.60.40.320. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR008979. Galactose-bd-like.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00703. Glyco_hydro_2. 1 hit.
[Graphical view]
SUPFAMiSSF49303. SSF49303. 3 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8PI23-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLSCHRVVP TPARLGLALA LAISQAWAAP PTAVTLDGGW RVRLVPGQEQ
60 70 80 90 100
GKTYPKAAAW LPAQVPGAVQ TDLIAAKIVP DPFYRDNEGK IQWAGLSDWQ
110 120 130 140 150
YQTRFTVDAA TLKREHVELV FDGLDTFAEV TLNGKQLLSA DNMFRQWRVD
160 170 180 190 200
AKSLLKRGDN LLEVKLYSPI KKIQPWLAKQ PYALPGAYDS AFGDEPEARH
210 220 230 240 250
SSTYVRKAPY NFGWDWGPRM VNAGIWKDVR VEAWDAVRVD GLHIAQQRVD
260 270 280 290 300
AHSAQVQAQL DLQAGRSGPV QVTLDVLGPD GQKVGQFTQD AVVDPGQNRV
310 320 330 340 350
DLAVRIANPK RWFPAGYGAQ DRYTFVASVR DADGDSQQIK RVTGLRSVEL
360 370 380 390 400
RREKDRFGKS MEIVINGIPI FAKGANLIPL DAFPARVTHE RMRSTLQDAR
410 420 430 440 450
DANMNMLRMW GGGHYQDDYF YDVADELGIM IWQDFMFGGA VPPYDVEFRE
460 470 480 490 500
NTRQEAIEQV KRLRDHPSLV LWCGNNEVQT GWENWGDRVK FKQSVDPEER
510 520 530 540 550
TRIERGMTTL FGTVFREVVA TYDSDVPYWA TSPGTDFDGA ADQTNDGDMH
560 570 580 590 600
YWKVWGGPAL PVTEYLNVTP RFMSEYGLQS FPDMRTVRAF AEPGDMDPES
610 620 630 640 650
PVMRVHQKFD KGNGNKRLML YIRREFGEPK DFESFVYLSQ LMQAEGINIA
660 670 680 690 700
ASHLRASRPQ SMGSLYWQLN DVWPGASWSS VDYYGRWKAL HYHARRFYAP
710 720 730 740 750
EMIAALRNDK GQTEVSLVSD RTTPLTARWR MRVMGMDGKV LSKREEKASV
760 770 780 790 800
NALSSQHVGN FSDKQLLGSA DPKRTYAVFE LLDGDTLLSR EVVFFAPAKQ
810 820 830 840 850
LALPAAKIDS QWRADGDGYA LTLTSDTLAR EVWLSFGDVD ATLSDNAFDL
860 870 880 890
LPGEPLTVRV TSKAALAQLQ SALQVRDLAA TLAGAPPEPQ EAAAAK
Length:896
Mass (Da):100,375
Last modified:October 1, 2002 - v1
Checksum:i85A22186DA8C2ACA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008923 Genomic DNA. Translation: AAM37920.1.
RefSeqiWP_011052019.1. NC_003919.1.

Genome annotation databases

EnsemblBacteriaiAAM37920; AAM37920; XAC3075.
GeneIDi14853804.
KEGGixac:XAC3075.
PATRICi24058279. VBIXanAxo33670_3193.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008923 Genomic DNA. Translation: AAM37920.1.
RefSeqiWP_011052019.1. NC_003919.1.

3D structure databases

ProteinModelPortaliQ8PI23.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi190486.XAC3075.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM37920; AAM37920; XAC3075.
GeneIDi14853804.
KEGGixac:XAC3075.
PATRICi24058279. VBIXanAxo33670_3193.

Phylogenomic databases

eggNOGiENOG4105D6I. Bacteria.
COG3250. LUCA.
HOGENOMiHOG000186861.
KOiK01192.
OMAiALATNWF.
OrthoDBiEOG6VHZ94.

Enzyme and pathway databases

BioCyciXAXO190486:GH55-3075-MONOMER.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
2.60.40.320. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR008979. Galactose-bd-like.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00703. Glyco_hydro_2. 1 hit.
[Graphical view]
SUPFAMiSSF49303. SSF49303. 3 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparison of the genomes of two Xanthomonas pathogens with differing host specificities."
    da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F.Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P.
    , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P.Jr., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A.Jr., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P.
    Nature 417:459-463(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 306Imported.

Entry informationi

Entry nameiQ8PI23_XANAC
AccessioniPrimary (citable) accession number: Q8PI23
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: May 11, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.