Q8PFC5 (Q8PFC5_XANAC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-xylosidase EMBL AAM38893.1

Gene names

Name:	xynB EMBL AAM38893.1
Ordered Locus Names:	XAC4058

Organism

Xanthomonas axonopodis pv. citri (Citrus canker) [Complete proteome] [HAMAP]

Taxonomic identifier

92829 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	502 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8PFC5 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: F559A5B1FF2F94D1	FASTA	502	56,767
	10 20 30 40 50 60 MAQHAAPRTI QLDLATAGAP VDRFYDLSVG SDFPGTLIRN DTQAHLVPAM QELGFRYIRF 70 80 90 100 110 120 HDVFHDVLGT VKEVDGKLVY DWTKLDQLYD ALLAKRIRPF VELGFTPSAM KTSEQTLFYW 130 140 150 160 170 180 KGNTSHPDPA KWTQLIDAYV RHIRARYGAE EVRQWYFEVW NEPNLKDFWE NADQQAYFDL 190 200 210 220 230 240 YANTARTIKA IDPQLRVGGP STAGAAWVPE LLAFVAKNTL PIDFVTTHTY GVDGGFLDEN 250 260 270 280 290 300 GKQDTKLSAS PDAIVGDVRR VRAQIQASPF PNLPLYFTEW SSSYTPRDFV HDSYISAPYI 310 320 330 340 350 360 LTKLKQVQGL VQGMSYWTYT DLFEEPGPPP TPFHGGFGLM NREGIRKPAW FAYKYLHALK 370 380 390 400 410 420 GRDVPLSDAH SLAAVDGTRV AALVWDWQQP VQAVSNTPFY TKQVPATDSA PLRMRMTHVP 430 440 450 460 470 480 AGTYQLQVRK TGYRRNDPLS LYIDMGMPKD LAPRQLTQLR QATRDAPEQD RRVRVGADGV 490 500 VEINVPMRSN DVVLLTLEPV AR

References

[1]

"Comparison of the genomes of two Xanthomonas pathogens with differing host specificities." da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P. , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P. Nature 417:459-463(2002) [PubMed: 12024217] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 306.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE008923 Genomic DNA. Translation: AAM38893.1.
RefSeq	NP_644357.1. NC_003919.1.
3D structure databases
HSSP	HSSP built from PDB template 1UHV based on UniProtKB P36906.
ProteinModelPortal	Q8PFC5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1158129.
GenomeReviews	Gene locus XAC4058 in contig AE008923_GR.
KEGG	xac:XAC4058.
NMPDR	fig|190486.1.peg.4001.
PATRIC	24060276. VBIXanAxo33670_4180.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG312506.
OMA	TEWSSSY.
ProtClustDB	CLSK872918.
Enzyme and pathway databases
BioCyc	XAXO190486:XAC4058-MONOMER.
Family and domain databases
InterPro	IPR000514. Glyco_hydro_39. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01198.
Pfam	PF01229. Glyco_hydro_39. 1 hit. [Graphical view]
PRINTS	PR00745. GLHYDRLASE39.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS01027. GLYCOSYL_HYDROL_F39. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8PFC5_XANAC

Accession

Primary (citable) accession number: Q8PFC5

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	December 14, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)