Q8PDD2 (GLGA_XANCP) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Glycogen synthase
EC=2.4.1.21

Alternative name(s):
Starch [bacterial glycogen] synthase

Gene names

Name:	glgA
Ordered Locus Names:	XCC0408

Organism

Xanthomonas campestris pv. campestris

Taxonomic identifier

340 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	474 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose. HAMAP MF_00484
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	starch synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 474	474	Glycogen synthase HAMAP MF_00484		PRO_0000188665
Sites
	Binding site	12	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q8PDD2 [UniParc]. Last modified October 10, 2002. Version 1. Checksum: 5ED45634F36239B2	FASTA	474	50,895
	10 20 30 40 50 60 MFVVSEMADF IKAGGLGDVA AALPRALRHR YDVRVLIPGY RAVLARAGKV EIVGRVLAHA 70 80 90 100 110 120 ALPACDIGRI VQSDGLPIYI LLSKELFERD GSPYVSTSGS EFEDNAIRFA TLSHAAAQIA 130 140 150 160 170 180 AGRAGLGWRP RLLHLNDWPC ALAAAYVRWS GGTTPCLLTI HNLAYQGLVP YSMAAALGIP 190 200 210 220 230 240 AERVSELEFY GQMSFLRGGI VHADHVNTVS VSYAQQITGP AQGCGLDRLL AGRAAKGALS 250 260 270 280 290 300 GIVNGIDASW DPRTDEYLDS HFSVNHWQGR QANAAQVRKA FGLRESTGPL FAVVSRLVHQ 310 320 330 340 350 360 KGLDLICEVA PQIVAAGGQI AVIGGGEPEI EQQVAELTRR YPGQVGAFIG FEEGLARRMF 370 380 390 400 410 420 AGADFLLMPS RFEPCGLSQM YAQRFGCLPI AHATGGLIDT VDDGVTGFLF QQASAEALRR 430 440 450 460 470 CLERAFRTFR LPSLLSAMRR AAMLRPSGWD VAGKKYISLY ERTAATAPAV ATVS

References

[1]

"Comparison of the genomes of two Xanthomonas pathogens with differing host specificities." da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P. , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P. Nature 417:459-463(2002) [PubMed: 12024217] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33913 / NCPPB 528 / LMG 568.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE008922 Genomic DNA. Translation: AAM39726.1.
RefSeq	NP_635802.1. NC_003902.1.
3D structure databases
ProteinModelPortal	Q8PDD2.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1001157.
GenomeReviews	Gene locus XCC0408 in contig AE008922_GR.
KEGG	xcc:XCC0408.
PATRIC	24071423. VBIXanCam115730_0448.
Phylogenomic databases
HOGENOM	HBG596384.
OMA	HAHDWPA.
ProtClustDB	PRK00654.
Enzyme and pathway databases
BioCyc	XCAM190485:XCC0408-MONOMER.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA_XANCP

Accession

Primary (citable) accession number: Q8PDD2

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 10, 2002
Last sequence update:	October 10, 2002
Last modified:	January 25, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program