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Protein

Glycogen synthase

Gene

glgA

Organism
Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathway: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei12 – 121ADP-glucoseUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciXCAM190485:GIXZ-408-MONOMER.
UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:XCC0408
OrganismiXanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
Taxonomic identifieri190485 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000001010 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 474474Glycogen synthasePRO_0000188665Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi190485.XCC0408.

Structurei

3D structure databases

ProteinModelPortaliQ8PDD2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiNAMRCRA.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8PDD2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFVVSEMADF IKAGGLGDVA AALPRALRHR YDVRVLIPGY RAVLARAGKV
60 70 80 90 100
EIVGRVLAHA ALPACDIGRI VQSDGLPIYI LLSKELFERD GSPYVSTSGS
110 120 130 140 150
EFEDNAIRFA TLSHAAAQIA AGRAGLGWRP RLLHLNDWPC ALAAAYVRWS
160 170 180 190 200
GGTTPCLLTI HNLAYQGLVP YSMAAALGIP AERVSELEFY GQMSFLRGGI
210 220 230 240 250
VHADHVNTVS VSYAQQITGP AQGCGLDRLL AGRAAKGALS GIVNGIDASW
260 270 280 290 300
DPRTDEYLDS HFSVNHWQGR QANAAQVRKA FGLRESTGPL FAVVSRLVHQ
310 320 330 340 350
KGLDLICEVA PQIVAAGGQI AVIGGGEPEI EQQVAELTRR YPGQVGAFIG
360 370 380 390 400
FEEGLARRMF AGADFLLMPS RFEPCGLSQM YAQRFGCLPI AHATGGLIDT
410 420 430 440 450
VDDGVTGFLF QQASAEALRR CLERAFRTFR LPSLLSAMRR AAMLRPSGWD
460 470
VAGKKYISLY ERTAATAPAV ATVS
Length:474
Mass (Da):50,895
Last modified:October 10, 2002 - v1
Checksum:i5ED45634F36239B2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008922 Genomic DNA. Translation: AAM39726.1.
RefSeqiNP_635802.1. NC_003902.1.
WP_011035661.1. NC_003902.1.

Genome annotation databases

EnsemblBacteriaiAAM39726; AAM39726; XCC0408.
GeneIDi1001157.
KEGGixcc:XCC0408.
PATRICi24071423. VBIXanCam115730_0448.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008922 Genomic DNA. Translation: AAM39726.1.
RefSeqiNP_635802.1. NC_003902.1.
WP_011035661.1. NC_003902.1.

3D structure databases

ProteinModelPortaliQ8PDD2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi190485.XCC0408.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM39726; AAM39726; XCC0408.
GeneIDi1001157.
KEGGixcc:XCC0408.
PATRICi24071423. VBIXanCam115730_0448.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiNAMRCRA.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciXCAM190485:GIXZ-408-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiGLGA_XANCP
AccessioniPrimary (citable) accession number: Q8PDD2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 10, 2002
Last sequence update: October 10, 2002
Last modified: June 24, 2015
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.