Q8PDD2 (GLGA_XANCP) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Glycogen synthase
EC=2.4.1.21

Alternative name(s):
Starch [bacterial glycogen] synthase

Gene names

Name:	glgA
Ordered Locus Names:	XCC0408

Organism

Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568) [Reference proteome] [HAMAP]

Taxonomic identifier

190485 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas › Xanthomonas campestris › Xanthomonas campestris pv. campestris

Protein attributes

Sequence length	474 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular_function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 474	474	Glycogen synthase HAMAP-Rule MF_00484		PRO_0000188665
Sites
	Binding site	12	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q8PDD2 [UniParc]. Last modified October 10, 2002. Version 1. Checksum: 5ED45634F36239B2	FASTA	474	50,895
	10 20 30 40 50 60 MFVVSEMADF IKAGGLGDVA AALPRALRHR YDVRVLIPGY RAVLARAGKV EIVGRVLAHA 70 80 90 100 110 120 ALPACDIGRI VQSDGLPIYI LLSKELFERD GSPYVSTSGS EFEDNAIRFA TLSHAAAQIA 130 140 150 160 170 180 AGRAGLGWRP RLLHLNDWPC ALAAAYVRWS GGTTPCLLTI HNLAYQGLVP YSMAAALGIP 190 200 210 220 230 240 AERVSELEFY GQMSFLRGGI VHADHVNTVS VSYAQQITGP AQGCGLDRLL AGRAAKGALS 250 260 270 280 290 300 GIVNGIDASW DPRTDEYLDS HFSVNHWQGR QANAAQVRKA FGLRESTGPL FAVVSRLVHQ 310 320 330 340 350 360 KGLDLICEVA PQIVAAGGQI AVIGGGEPEI EQQVAELTRR YPGQVGAFIG FEEGLARRMF 370 380 390 400 410 420 AGADFLLMPS RFEPCGLSQM YAQRFGCLPI AHATGGLIDT VDDGVTGFLF QQASAEALRR 430 440 450 460 470 CLERAFRTFR LPSLLSAMRR AAMLRPSGWD VAGKKYISLY ERTAATAPAV ATVS

References

[1]

"Comparison of the genomes of two Xanthomonas pathogens with differing host specificities." da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P. , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P. Nature 417:459-463(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33913 / NCPPB 528 / LMG 568.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE008922 Genomic DNA. Translation: AAM39726.1.
RefSeq	NP_635802.1. NC_003902.1.
3D structure databases
ProteinModelPortal	Q8PDD2.
ModBase	Search...
Protein-protein interaction databases
STRING	190485.XCC0408.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAM39726; AAM39726; XCC0408.
GeneID	1001157.
KEGG	xcc:XCC0408.
PATRIC	24071423. VBIXanCam115730_0448.
Phylogenomic databases
eggNOG	COG0297.
HOGENOM	HOG000294941.
KO	K00703.
OMA	NHIRFAR.
ProtClustDB	PRK00654.
Enzyme and pathway databases
UniPathway	UPA00164.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth.
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. glgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA_XANCP

Accession

Primary (citable) accession number: Q8PDD2

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 10, 2002
Last sequence update:	October 10, 2002
Last modified:	May 1, 2013
This is version 61 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program