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Protein
Submitted name:

Uncharacterized protein

Gene

XCC0516

Organism
Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciXCAM190485:GIXZ-516-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:XCC0516Imported
OrganismiXanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)Imported
Taxonomic identifieri190485 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
Proteomesi
  • UP000001010 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi190485.XCC0516.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2GSCX-ray2.45A/B/C/D/E1-128[»]
ProteinModelPortaliQ8PD29.
SMRiQ8PD29.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8PD29.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105VGT. Bacteria.
ENOG41121RZ. LUCA.
HOGENOMiHOG000024793.
OMAiMKTHKDL.

Family and domain databases

Gene3Di1.20.1440.60. 1 hit.
InterProiIPR012657. 23S_rRNA-intervening_sequence.
[Graphical view]
PfamiPF05635. 23S_rRNA_IVP. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02436. TIGR02436. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8PD29-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENRESAQRP HERLDAWRDS MELVEMIYRL TEVFPDQERY GLTAQLRRAA
60 70 80 90 100
VSIPSNIAEG AARRSTPDYS RFLSIARGSL SELDTQVQIA ARLGYSRSED
110 120
DQSVRRQVDL VFAKLTALMN ALRRRGAA
Length:128
Mass (Da):14,599
Last modified:October 1, 2002 - v1
Checksum:iB03BC3E915533D58
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008922 Genomic DNA. Translation: AAM39832.1.
RefSeqiNP_635908.1. NC_003902.1.
WP_011035765.1. NC_003902.1.

Genome annotation databases

EnsemblBacteriaiAAM39832; AAM39832; XCC0516.
GeneIDi1001257.
KEGGixcc:XCC0516.
PATRICi24071661. VBIXanCam115730_0566.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008922 Genomic DNA. Translation: AAM39832.1.
RefSeqiNP_635908.1. NC_003902.1.
WP_011035765.1. NC_003902.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2GSCX-ray2.45A/B/C/D/E1-128[»]
ProteinModelPortaliQ8PD29.
SMRiQ8PD29.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi190485.XCC0516.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM39832; AAM39832; XCC0516.
GeneIDi1001257.
KEGGixcc:XCC0516.
PATRICi24071661. VBIXanCam115730_0566.

Phylogenomic databases

eggNOGiENOG4105VGT. Bacteria.
ENOG41121RZ. LUCA.
HOGENOMiHOG000024793.
OMAiMKTHKDL.

Enzyme and pathway databases

BioCyciXCAM190485:GIXZ-516-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ8PD29.

Family and domain databases

Gene3Di1.20.1440.60. 1 hit.
InterProiIPR012657. 23S_rRNA-intervening_sequence.
[Graphical view]
PfamiPF05635. 23S_rRNA_IVP. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02436. TIGR02436. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ8PD29_XANCP
AccessioniPrimary (citable) accession number: Q8PD29
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: November 2, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.