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Protein
Submitted name:

Type IV fimbriae assembly protein

Gene

pilZ

Organism
Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi45 – 473Cyclicdiguanosine monophosphateCombined sources

GO - Molecular functioni

  1. cyclic-di-GMP binding Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Nucleotide-bindingCombined sources

Enzyme and pathway databases

BioCyciXCAM190485:GIXZ-1023-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Type IV fimbriae assembly proteinImported
Gene namesi
Name:pilZImported
Ordered Locus Names:XCC1024Imported
OrganismiXanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)Imported
Taxonomic identifieri190485 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000001010: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi190485.XCC1024.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3DSGX-ray2.09A/B/C8-106[»]
4F48X-ray3.00B1-117[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8PBU4.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000290810.
KOiK02676.
OMAiGIGVQFS.
OrthoDBiEOG69SKDG.

Family and domain databases

InterProiIPR009875. PilZ_domain.
[Graphical view]
PfamiPF07238. PilZ. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8PBU4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSAMNARQGI LSLALKDKAA LYSAYMPFVK SGGIFVPTPK RYMLGDEVFL
60 70 80 90 100
LLTLPDSSER LPVAGKVVWT TPAGAQGNRA AGIGVQFPDG PEGEAVRNKI
110
ETLLAGLTTS DKPTHTM
Length:117
Mass (Da):12,420
Last modified:October 1, 2002 - v1
Checksum:iE3C3CC4CC4D9FE35
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008922 Genomic DNA. Translation: AAM40324.1.
RefSeqiNP_636400.1. NC_003902.1.

Genome annotation databases

EnsemblBacteriaiAAM40324; AAM40324; XCC1024.
GeneIDi1001528.
KEGGixcc:XCC1024.
PATRICi24072739. VBIXanCam115730_1089.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008922 Genomic DNA. Translation: AAM40324.1.
RefSeqiNP_636400.1. NC_003902.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3DSGX-ray2.09A/B/C8-106[»]
4F48X-ray3.00B1-117[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi190485.XCC1024.

Protocols and materials databases

DNASUi1001528.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM40324; AAM40324; XCC1024.
GeneIDi1001528.
KEGGixcc:XCC1024.
PATRICi24072739. VBIXanCam115730_1089.

Phylogenomic databases

HOGENOMiHOG000290810.
KOiK02676.
OMAiGIGVQFS.
OrthoDBiEOG69SKDG.

Enzyme and pathway databases

BioCyciXCAM190485:GIXZ-1023-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ8PBU4.

Family and domain databases

InterProiIPR009875. PilZ_domain.
[Graphical view]
PfamiPF07238. PilZ. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Comparison of the genomes of two Xanthomonas pathogens with differing host specificities."
    da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P.
    , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P.
    Nature 417:459-463(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33913 / NCPPB 528 / LMG 568Imported.
  2. "XC1028 from Xanthomonas campestris adopts a PilZ domain-like structure without a c-di-GMP switch."
    Li T.N., Chin K.H., Liu J.H., Wang A.H., Chou S.H.
    Proteins 75:282-288(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.09 ANGSTROMS) OF 8-106.

Entry informationi

Entry nameiQ8PBU4_XANCP
AccessioniPrimary (citable) accession number: Q8PBU4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: January 7, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.