Q8PBP2 (Q8PBP2_XANCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase EMBL AAM40376.1

Gene names

Name:	srfJ EMBL AAM40376.1
Ordered Locus Names:	XCC1077

Organism

Xanthomonas campestris pv. campestris

Taxonomic identifier

340 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	548 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL AAM40376.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro lysosome organization Inferred from electronic annotation. Source: InterPro sphingolipid metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	lysosome Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro glucosylceramidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8PBP2 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: 7609796821F3B92F	FASTA	548	58,984
	10 20 30 40 50 60 MLRRVGRLGL VTNLGGCTVK RAIAWSMVGV LGVWGAATET VLASASASAT ATATATATAT 70 80 90 100 110 120 PIPVPVSTAS ASTPASKAVE AAVADAAVPP AAPAGALRVY TSAQGATQQM RVSTVDVPTA 130 140 150 160 170 180 GHALTEKENS IFVNPQRRFQ ALLGIGGAIT DSSAETFAKL PKQAQRQLLT AYYDPDKGIG 190 200 210 220 230 240 YTLARTTIHS SDFSSGSYTY IKEGDAALKT FSVQHDAKYR IPMLRQAIAA AGGTLTTFAS 250 260 270 280 290 300 PWSAPAFMKD SNAMLKGGKL LPEYAQAWAT YYTRFIAAYE KAGIPIWGIS LQNEPMAVQT 310 320 330 340 350 360 WESMLFSAEE ERDFLKNHLG PTMAKAGYGD RKIIVWDHNR DMMVHRAHVI FDDPEASKYA 370 380 390 400 410 420 WGMGFHWYET WAGFAPMVEN VAAVAQAYPD KHLLLTEAAV EKFDPAKLQH WPNGERYGTA 430 440 450 460 470 480 IINDLNHGAV GWTDWNILLD EHGGPNHVGN YCFAPVHANT RTGEVIYTPS YWYIGHFSKF 490 500 510 520 530 540 IRPGAQRVSA ASSRSNLATT AFVNSDGSLA TVVMNATDVA IRYNLYVGDA SSVLEIPAHA IQTVVLAQ

References

[1]

"Comparison of the genomes of two Xanthomonas pathogens with differing host specificities." da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P. , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P. Nature 417:459-463(2002) [PubMed: 12024217] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33913 / NCPPB 528 / LMG 568.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE008922 Genomic DNA. Translation: AAM40376.1.
RefSeq	NP_636452.2. NC_003902.1.
3D structure databases
HSSP	HSSP built from PDB template 1OGS based on UniProtKB P04062.
ProteinModelPortal	Q8PBP2.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	999267.
GenomeReviews	Gene locus XCC1077 in contig AE008922_GR.
KEGG	xcc:XCC1077.
PATRIC	24072858. VBIXanCam115730_1147.
Phylogenomic databases
HOGENOM	HBG380604.
OMA	WSAPAFM.
ProtClustDB	CLSK894855.
Enzyme and pathway databases
BioCyc	XCAM190485:XCC1077-MONOMER.
Family and domain databases
InterPro	IPR013780. Glyco_hydro_13_b. IPR001139. Glyco_hydro_30. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01201.
PANTHER	PTHR11069. Glyco_hydro_30. 1 hit.
Pfam	PF02055. Glyco_hydro_30. 1 hit. [Graphical view]
PRINTS	PR00843. GLHYDRLASE30.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8PBP2_XANCP

Accession

Primary (citable) accession number: Q8PBP2

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)