Q8PBD1 (Q8PBD1_XANCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-L-arabinosidase EMBL AAM40489.1

Gene names

Ordered Locus Names:

XCC1191

Organism

Xanthomonas campestris pv. campestris

Taxonomic identifier

340 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	508 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	L-arabinose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-N-arabinofuranosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8PBD1 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: C25FFA916FD95A1F	FASTA	508	55,394
	10 20 30 40 50 60 MLIALTVSGS GAQAADVQVR GTLQVEKPGA QVSRHLFGQF AEHLGTGVYG GLWVGPESSI 70 80 90 100 110 120 PNTRGYRNDV LAALKAIAVP NIRWPGGCFA DEYHWRDGIG APGKRPISVN THWGGVEESN 130 140 150 160 170 180 RFGTHEFMDF TELLGTDAYV AGNVGNAAPD EIAQWVEYMT AGTRSSLAEQ RRANGRQAPW 190 200 210 220 230 240 KVPFFGVGNE LWGCGGNMRV EYAADVYRRY QTFVKAPSDQ KILKIAPGPN NDDYHWTEVM 250 260 270 280 290 300 MREAGTLMDG LSLHYYTVPG GWPPRASSTD FDEAAWIETL SRTLVMDELI TKHSAIMDRY 310 320 330 340 350 360 DPAKKVALVV DEWGTWYAGL PGANPGFLHQ QNSLRDALVA ALNIDIFSAH ADRVRMANIA 370 380 390 400 410 420 QMINVLQAMI LTDGDRMVLT PTYHVFAMYK PFQDATHLPL QLQPPDYRHG DIHVPAVHGS 430 440 450 460 470 480 AVKAKDGHVY VALTNLDANS PATVSVAVDG VSVRGVEGQL LTAPTITAHN TFAAPRTVQP 490 500 TAFTGARIQG NTLQVALPAR AIVMLKLR

References

[1]

"Comparison of the genomes of two Xanthomonas pathogens with differing host specificities." da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P. , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P. Nature 417:459-463(2002) [PubMed: 12024217] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33913 / NCPPB 528 / LMG 568.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE008922 Genomic DNA. Translation: AAM40489.1.
RefSeq	NP_636565.1. NC_003902.1.
3D structure databases
ProteinModelPortal	Q8PBD1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1001619.
GenomeReviews	Gene locus XCC1191 in contig AE008922_GR.
KEGG	xcc:XCC1191.
PATRIC	24073127. VBIXanCam115730_1280.
Phylogenomic databases
HOGENOM	HBG654651.
OMA	IPVLRWP.
ProtClustDB	CLSK873157.
Enzyme and pathway databases
BioCyc	XCAM190485:XCC1191-MONOMER.
Family and domain databases
InterPro	IPR010720. Alpha-L-AF_C. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01209.
Pfam	PF06964. Alpha-L-AF_C. 1 hit. [Graphical view]
SMART	SM00813. Alpha-L-AF_C. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8PBD1_XANCP

Accession

Primary (citable) accession number: Q8PBD1

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	December 14, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)