Q8PBA4 (Q8PBA4_XANCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
HrpW protein EMBL AAM40517.1

Gene names

Name:	hrpW EMBL AAM40517.1
Ordered Locus Names:	XCC1219

Organism

Xanthomonas campestris pv. campestris

Taxonomic identifier

340 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	324 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	pectate lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8PBA4 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: 0A9B3A0E1C52508B	FASTA	324	33,393
	10 20 30 40 50 60 MQRMLRDMLQ PQDQPFSDGQ PPTNPNPTPP MPPSRPPCST NPGGQHGSGT GDGSGGNGGN 70 80 90 100 110 120 HNRGNGGTCG TGADHRASPT NPGQAVRPCP DGPQAPLPPG KVVTAPPGLQ NKTIVVHKGE 130 140 150 160 170 180 VFDGKGQTYI GGPGLGDGSQ NEHQQPLFVV EDGGSLCNVN MKGGGDGVHF MGSGKMVNCV 190 200 210 220 230 240 NDDVSEDAVT IDGQGNREHD ARIAGCRPEV SGRPKVDIIN CTFKNAADKV VQDNGAADVV 250 260 270 280 290 300 MSGCTVNGAG KVFRTNGGHA DIDTHLQVEN CDFQQVKEAV FRTDAPGATV KLANLKTDAP 310 320 DEVIAPSAFQ ATGATRIGHQ PYSG

References

[1]

"Comparison of the genomes of two Xanthomonas pathogens with differing host specificities." da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P. , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P. Nature 417:459-463(2002) [PubMed: 12024217] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33913 / NCPPB 528 / LMG 568.

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Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE008922 Genomic DNA. Translation: AAM40517.1.
RefSeq	NP_636593.2. NC_003902.1.
3D structure databases
HSSP	HSSP built from PDB template 1EE6 based on UniProtKB Q9RHW0.
ProteinModelPortal	Q8PBA4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1001635.
GenomeReviews	Gene locus XCC1219 in contig AE008922_GR.
KEGG	xcc:XCC1219.
PATRIC	24073187. VBIXanCam115730_1310.
Phylogenomic databases
HOGENOM	HBG752599.
OMA	EDAITID.
ProtClustDB	CLSK630256.
Enzyme and pathway databases
BioCyc	XCAM190485:XCC1219-MONOMER.
Family and domain databases
InterPro	IPR004898. Pectate_lyase_cat. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
Pfam	PF03211. Pectate_lyase. 1 hit. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8PBA4_XANCP

Accession

Primary (citable) accession number: Q8PBA4

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)