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Protein

Pyridoxal kinase

Gene

pdxY

Organism
Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Catalytic activityi

ATP + pyridoxal = ADP + pyridoxal 5'-phosphate.SAAS annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. metal ion binding Source: UniProtKB-KW
  3. pyridoxal kinase activity Source: UniProtKB-EC

GO - Biological processi

  1. pyridoxal 5'-phosphate salvage Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

KinaseSAAS annotationImported, Transferase

Keywords - Ligandi

ATP-bindingSAAS annotation, Metal-bindingSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciXCAM190485:GIXZ-1474-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Pyridoxal kinaseSAAS annotation (EC:2.7.1.35SAAS annotation)
Gene namesi
Name:pdxYImported
Ordered Locus Names:XCC1476Imported
OrganismiXanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)Imported
Taxonomic identifieri190485 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000001010 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi190485.XCC1476.

Structurei

3D structure databases

ProteinModelPortaliQ8PAK7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000258173.
KOiK00868.
OMAiGRKIYTE.
OrthoDBiEOG69PQ1X.

Family and domain databases

Gene3Di3.40.1190.20. 1 hit.
InterProiIPR013749. PM/HMP-P_kinase-1.
IPR004625. PyrdxlP_synth_PyrdxlKinase.
IPR029056. Ribokinase-like.
[Graphical view]
PANTHERiPTHR10534. PTHR10534. 1 hit.
PfamiPF08543. Phos_pyr_kin. 1 hit.
[Graphical view]
SUPFAMiSSF53613. SSF53613. 1 hit.
TIGRFAMsiTIGR00687. pyridox_kin. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8PAK7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDATDSHLV HGRRQRPDGP APVDVISVQS QLVYGHAGNS AAVPPLRALG
60 70 80 90 100
LRVAEVPTTL LSNAPFYATL RGRILPADWL ADLLLGATER GLPQRARLLV
110 120 130 140 150
SGYFGSLANG EAFADWLEQT LPQAPQLRYC LDPVIGDTHT GPYVEPGLER
160 170 180 190 200
VFAERLLPHA WLVTPNAFEL GRLTGLPSLE QDDAIVAARA LLARGPQWVL
210 220 230 240 250
AHSVAGGTGE LVTLAVSAEA VYRWASPHLP VDVAGTGDVL MALLIGLLLR
260 270 280 290 300
DVPFEQAVGH ALTGVHAALE ATLAAGFEEF DVLAAAPAAL GTAPRFAVER

LA
Length:302
Mass (Da):31,916
Last modified:October 1, 2002 - v1
Checksum:iF0D4CC35F4E6EAC9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008922 Genomic DNA. Translation: AAM40772.1.
RefSeqiNP_636848.1. NC_003902.1.

Genome annotation databases

EnsemblBacteriaiAAM40772; AAM40772; XCC1476.
GeneIDi1001894.
KEGGixcc:XCC1476.
PATRICi24073731. VBIXanCam115730_1581.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008922 Genomic DNA. Translation: AAM40772.1.
RefSeqiNP_636848.1. NC_003902.1.

3D structure databases

ProteinModelPortaliQ8PAK7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi190485.XCC1476.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM40772; AAM40772; XCC1476.
GeneIDi1001894.
KEGGixcc:XCC1476.
PATRICi24073731. VBIXanCam115730_1581.

Phylogenomic databases

HOGENOMiHOG000258173.
KOiK00868.
OMAiGRKIYTE.
OrthoDBiEOG69PQ1X.

Enzyme and pathway databases

BioCyciXCAM190485:GIXZ-1474-MONOMER.

Family and domain databases

Gene3Di3.40.1190.20. 1 hit.
InterProiIPR013749. PM/HMP-P_kinase-1.
IPR004625. PyrdxlP_synth_PyrdxlKinase.
IPR029056. Ribokinase-like.
[Graphical view]
PANTHERiPTHR10534. PTHR10534. 1 hit.
PfamiPF08543. Phos_pyr_kin. 1 hit.
[Graphical view]
SUPFAMiSSF53613. SSF53613. 1 hit.
TIGRFAMsiTIGR00687. pyridox_kin. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparison of the genomes of two Xanthomonas pathogens with differing host specificities."
    da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P.
    , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P.
    Nature 417:459-463(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33913 / NCPPB 528 / LMG 568Imported.

Entry informationi

Entry nameiQ8PAK7_XANCP
AccessioniPrimary (citable) accession number: Q8PAK7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: March 4, 2015
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.