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Protein
Submitted name:

Hydrolase, haloacid delahogenase-like family

Gene

XCC3796

Organism
Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi18 – 181MagnesiumCombined sources
Metal bindingi20 – 201Magnesium; via carbonyl oxygenCombined sources
Metal bindingi186 – 1861MagnesiumCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Keywords - Ligandi

MagnesiumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BioCyciXCAM190485:GIXZ-3794-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Hydrolase, haloacid delahogenase-like familyImported
Gene namesi
Ordered Locus Names:XCC3796Imported
OrganismiXanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)Imported
Taxonomic identifieri190485 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
Proteomesi
  • UP000001010 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi190485.XCC3796.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PKEX-ray1.81A/B1-250[»]
ProteinModelPortaliQ8P4B4.
SMRiQ8P4B4. Positions 1-250.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8P4B4.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini72 – 193122HAD-like_domInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG41069J2. Bacteria.
COG1011. LUCA.
HOGENOMiHOG000250935.
KOiK07025.
OMAiKGDLFDQ.
OrthoDBiEOG61ZTJW.

Family and domain databases

Gene3Di1.10.150.240. 1 hit.
3.40.50.1000. 1 hit.
InterProiIPR023214. HAD-like_dom.
IPR023198. PGP_dom2.
[Graphical view]
PfamiPF13419. HAD_2. 1 hit.
[Graphical view]
SUPFAMiSSF56784. SSF56784. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8P4B4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTPIAQRDGQ AIQLVGFDGD DTLWKSEDYY RTAEADFEAI LSGYLDLGDS
60 70 80 90 100
RMQQHLLAVE RRNLKIFGYG AKGMTLSMIE TAIELTEARI EARDIQRIVE
110 120 130 140 150
IGRATLQHPV EVIAGVREAV AAIAADYAVV LITKGDLFHQ EQKIEQSGLS
160 170 180 190 200
DLFPRIEVVS EKDPQTYARV LSEFDLPAER FVMIGNSLRS DVEPVLAIGG
210 220 230 240 250
WGIYTPYAVT WAHEQDHGVA ADEPRLREVP DPSGWPAAVR ALDAQAGRQQ
Length:250
Mass (Da):27,720
Last modified:October 1, 2002 - v1
Checksum:i541E30CED9E04BA2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008922 Genomic DNA. Translation: AAM43042.1.
RefSeqiNP_639141.1. NC_003902.1.
WP_011038877.1. NC_003902.1.

Genome annotation databases

EnsemblBacteriaiAAM43042; AAM43042; XCC3796.
GeneIDi1000373.
KEGGixcc:XCC3796.
PATRICi24078760. VBIXanCam115730_4065.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008922 Genomic DNA. Translation: AAM43042.1.
RefSeqiNP_639141.1. NC_003902.1.
WP_011038877.1. NC_003902.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PKEX-ray1.81A/B1-250[»]
ProteinModelPortaliQ8P4B4.
SMRiQ8P4B4. Positions 1-250.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi190485.XCC3796.

Protocols and materials databases

DNASUi1000373.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM43042; AAM43042; XCC3796.
GeneIDi1000373.
KEGGixcc:XCC3796.
PATRICi24078760. VBIXanCam115730_4065.

Phylogenomic databases

eggNOGiENOG41069J2. Bacteria.
COG1011. LUCA.
HOGENOMiHOG000250935.
KOiK07025.
OMAiKGDLFDQ.
OrthoDBiEOG61ZTJW.

Enzyme and pathway databases

BioCyciXCAM190485:GIXZ-3794-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ8P4B4.

Family and domain databases

Gene3Di1.10.150.240. 1 hit.
3.40.50.1000. 1 hit.
InterProiIPR023214. HAD-like_dom.
IPR023198. PGP_dom2.
[Graphical view]
PfamiPF13419. HAD_2. 1 hit.
[Graphical view]
SUPFAMiSSF56784. SSF56784. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Comparison of the genomes of two Xanthomonas pathogens with differing host specificities."
    da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F.Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P.
    , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P.Jr., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A.Jr., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P.
    Nature 417:459-463(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25Imported.
  2. "Crystal structure of haloacid delahogenase-like family hydrolase (NP_639141.1) from Xanthomonas campestris at 1.81 A resolution."
    Joint Center for Structural Genomics (JCSG)
    Submitted (APR-2007) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.81 ANGSTROMS) IN COMPLEX WITH MAGNESIUM.

Entry informationi

Entry nameiQ8P4B4_XANCP
AccessioniPrimary (citable) accession number: Q8P4B4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: May 11, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.