Q8P3U4 (Q8P3U4_XANCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-xylosidase EMBL AAM43196.1

Gene names

Name:	xynB EMBL AAM43196.1
Ordered Locus Names:	XCC3975

Organism

Xanthomonas campestris pv. campestris

Taxonomic identifier

340 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	521 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8P3U4 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: E8E29AB19586D621	FASTA	521	58,345
	10 20 30 40 50 60 MRLTLLLATT LACCTATAAS AQPAAQREIQ LDIASAGASV DRFYALSVGS DFPGTLIRDD 70 80 90 100 110 120 TQAHLLPAVQ ELGFRYIRFH DVFHDVLGTV KEVDGTLVYD WTQLDKLYDA LLAKKIRPFV 130 140 150 160 170 180 ELGFTPTAMK TSEQTLFYWK GNTSHPDPAK WTQLIDAYVR HIRARYGADE VRQWYFEVWN 190 200 210 220 230 240 VPNLKDFWEN ADQQAYFDLY ANTARTIKAI DPQLRVGGPS TAGAAWVPEL LAFVQKNKLP 250 260 270 280 290 300 IDFVTTHTYG VDGGFLDEDG KQDTKLSASP EAIVGDVRRV RAQIQASPYP DLPLFFTEWS 310 320 330 340 350 360 SSYTPRDFVH DSYISAPYIL TKLKQVQGVV QGMSYWTYTD LFEEPGPPPT PFHGGFGLMN 370 380 390 400 410 420 REGIRKPAWF AYKYLNALQG RSLAVDDAHT LAAVDGKRIA AVAWDWQQPV QAVSNTPFYT 430 440 450 460 470 480 RQVPASDSKA IVFRLAHVPA GTYRLQVRKT GYRRNDPLSL YIDMGMPKQL AADQLIQLQQ 490 500 510 520 ATRDAPEQDR RVRVGADGAV AVTVPMRSND VVLLTLEPAT R

References

[1]

"Comparison of the genomes of two Xanthomonas pathogens with differing host specificities." da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P. , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P. Nature 417:459-463(2002) [PubMed: 12024217] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33913 / NCPPB 528 / LMG 568.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE008922 Genomic DNA. Translation: AAM43196.1.
RefSeq	NP_639314.1. NC_003902.1.
3D structure databases
HSSP	HSSP built from PDB template 1UHV based on UniProtKB P36906.
ProteinModelPortal	Q8P3U4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1000676.
GenomeReviews	Gene locus XCC3975 in contig AE008922_GR.
KEGG	xcc:XCC3975.
PATRIC	24079162. VBIXanCam115730_4257.
Phylogenomic databases
HOGENOM	HBG312506.
OMA	TEWSSSY.
ProtClustDB	CLSK872918.
Enzyme and pathway databases
BioCyc	XCAM190485:XCC3975-MONOMER.
Family and domain databases
InterPro	IPR000514. Glyco_hydro_39. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01198.
Pfam	PF01229. Glyco_hydro_39. 1 hit. [Graphical view]
PRINTS	PR00745. GLHYDRLASE39.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8P3U4_XANCP

Accession

Primary (citable) accession number: Q8P3U4

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)