RTS beta protein - Xanthomonas campestris pv. campestris

Preferred order of sections

Names and origin

Protein names

Submitted name:
RTS beta protein EMBL AAM43290.1

Gene names

Ordered Locus Names:

XCC4069

Organism

Xanthomonas campestris pv. campestris

Taxonomic identifier

340 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	441 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Magnesium PDB 1YEY PDB 2HNE PDB 2HXT PDB 2HXU Metal-binding SAAS SAAS013342 PDB 1YEY PDB 2HNE PDB 2HXT PDB 2HXU
Technical term	3D-structure PDB 1YEY PDB 2HNE PDB 2HXT PDB 2HXU Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Metal binding

248

1

Magnesium 1 PDB 1YEY PDB 2HNE PDB 2HXT PDB 2HXU

Metal binding

248

1

Magnesium 2 PDB 2HNE PDB 2HXT PDB 2HXU

Metal binding

274

1

Magnesium 1 PDB 1YEY PDB 2HNE PDB 2HXT PDB 2HXU

Metal binding

274

1

Magnesium 2 PDB 2HNE PDB 2HXT PDB 2HXU

Metal binding

301

1

Magnesium 1 PDB 1YEY PDB 2HNE PDB 2HXT PDB 2HXU

Metal binding

301

1

Magnesium 2 PDB 2HNE PDB 2HXT PDB 2HXU

Sequences

Sequence

Length

Mass (Da)

Tools

Q8P3K2 [UniParc].

Last modified October 1, 2002. Version 1.
Checksum: 4BAF5BEC1D1E3327
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FASTA

441

48,124

        10         20         30         40         50         60 
MRTIIALETH DVRFPTSREL DGSDAMNPDP DYSAAYVVLR TDGAEDLAGY GLVFTIGRGN 

        70         80         90        100        110        120 
DVQTAAVAAL AEHVVGLSVD KVIADLGAFA RRLTNDSQLR WLGPEKGVMH MAIGAVINAA 

       130        140        150        160        170        180 
WDLAARAANK PLWRFIAELT PEQLVDTIDF RYLSDALTRD EALAILRDAQ PQRAARTATL 

       190        200        210        220        230        240 
IEQGYPAYTT SPGWLGYSDE KLVRLAKEAV ADGFRTIKLK VGANVQDDIR RCRLARAAIG 

       250        260        270        280        290        300 
PDIAMAVDAN QRWDVGPAID WMRQLAEFDI AWIEEPTSPD DVLGHAAIRQ GITPVPVSTG 

       310        320        330        340        350        360 
EHTQNRVVFK QLLQAGAVDL IQIDAARVGG VNENLAILLL AAKFGVRVFP HAGGVGLCEL 

       370        380        390        400        410        420 
VQHLAMADFV AITGKMEDRA IEFVDHLHQH FLDPVRIQHG RYLAPEVPGF SAEMHPASIA 

       430        440 
EFSYPDGRFW VEDLAASKAK A

« Hide

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Comparison of the genomes of two Xanthomonas pathogens with differing host specificities." da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P. Kitajima J.P. Nature 417:459-463(2002) [PubMed: 12024217] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33913 / NCPPB 528 / LMG 568.
[2]	"Evolution of enzymatic activities in the enolase superfamily: L-fuconate dehydratase from Xanthomonas campestris." Yew W.S., Fedorov A.A., Fedorov E.V., Rakus J.F., Pierce R.W., Almo S.C., Gerlt J.A. Biochemistry 45:14582-14597(2006) [PubMed: 17144652] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) IN COMPLEX WITH MAGNESIUM.
[3]	"Crystal Structure of L-fuconate Dehydratase from Xanthomonas campestris pv. campestris str. ATCC 33913." Fedorov A.A., Fedorov E.V., Yew W.S., Gerlt J.A., Almo S.C. Submitted (DEC-2004) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.34 ANGSTROMS) IN COMPLEX WITH MAGNESIUM.
[4]	"Crystal structure of l-fuconate dehydratase from xanthomonas campestris pv. campestris str. ATCC 33913." Fedorov A.A., Fedorov E.V., Yew W.S., Gerlt J.A., Almo S.C. Submitted (JUL-2006) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 1-436 IN COMPLEX WITH MAGNESIUM.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE008922 Genomic DNA. Translation: AAM43290.1.

RefSeq

NP_639408.1. NC_003902.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1YEY	X-ray	2.34	A/B/C/D	1-441	[»]
2HNE	X-ray	2.00	A/B/C/D	1-436	[»]
2HXT	X-ray	1.70	A	1-441	[»]
2HXU	X-ray	1.80	A	1-441	[»]

ProteinModelPortal

Q8P3K2.

SMR

Q8P3K2. Positions 1-435.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

1000844.

GenomeReviews

Gene locus XCC4069 in contig AE008922_GR.

KEGG

xcc:XCC4069.

PATRIC

24079370. VBIXanCam115730_4361.

Phylogenomic databases

HOGENOM

HBG299435.

OMA

GPEKGVI.

ProtClustDB

CLSK888889.

Enzyme and pathway databases

BioCyc

XCAM190485:XCC4069-MONOMER.

Family and domain databases

InterPro

IPR013342. Mandelate_racemase_C.
IPR013341. Mandelate_racemase_N.
IPR001354. MR_MLE.
[Graphical view]

PANTHER

PTHR13794. MR_MLE. 1 hit.

Pfam

PF01188. MR_MLE. 1 hit.
PF02746. MR_MLE_N. 1 hit.
[Graphical view]

SMART

SM00922. MR_MLE. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q8P3K2_XANCP

Accession

Primary (citable) accession number: Q8P3K2

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	December 14, 2011
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)