Q8P3F6 (Q8P3F6_XANCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-1,4-beta-xylanase A EMBL AAM43336.1

Gene names

Name:	xynA EMBL AAM43336.1
Ordered Locus Names:	XCC4115

Organism

Xanthomonas campestris pv. campestris

Taxonomic identifier

340 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	385 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432

Ontologies

Keywords
Biological process	Xylan degradation EMBL AAM43336.1
Molecular function	Glycosidase RuleBase RU003432 Hydrolase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8P3F6 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: 4DBE2EAF029E3FDC	FASTA	385	42,180
	10 20 30 40 50 60 MLLGLLGMAV SPIASAACAP GTTALKDAYA GGFLIGTAVN TDIVSGKDAA SAALVGCHFN 70 80 90 100 110 120 AVTAENVMKA EVVAPQPGVF DFTAADAFVA DRQRRGMFIV GHTLVWHNQT PEWFFVDANG 130 140 150 160 170 180 KPNTSQAQLE RMRAHIARVA GRYVGKVQAW DVVNEIIDED GSYRSTNWVQ RVGDGDTVVR 190 200 210 220 230 240 NAFAFAQRYA PDAQLYYNDF NAWRPAKRDG IVRMVKMLQQ AGIRIDGVGM QGHWGLNYPS 250 260 270 280 290 300 VQDIEAAIDA YAALGVKVMI TELDIDVLPV TKEGQVIGTG FAHKQFQLPE FKHFLDPYPD 310 320 330 340 350 360 GLPPQVQTQL RDRYAELFAL FWRKRDKLAR VSVWGVSDGM SWKNDYPVPG RTNYPLLFDR 370 380 NHQPKPALDA VLAVPAGASG KQAEG

References

[1]

"Comparison of the genomes of two Xanthomonas pathogens with differing host specificities." da Silva A.C.R., Ferro J.A., Reinach F.C., Farah C.S., Furlan L.R., Quaggio R.B., Monteiro-Vitorello C.B., Van Sluys M.A., Almeida N.F. Jr., Alves L.M.C., do Amaral A.M., Bertolini M.C., Camargo L.E.A., Camarotte G., Cannavan F., Cardozo J., Chambergo F., Ciapina L.P. , Cicarelli R.M.B., Coutinho L.L., Cursino-Santos J.R., El-Dorry H., Faria J.B., Ferreira A.J.S., Ferreira R.C.C., Ferro M.I.T., Formighieri E.F., Franco M.C., Greggio C.C., Gruber A., Katsuyama A.M., Kishi L.T., Leite R.P., Lemos E.G.M., Lemos M.V.F., Locali E.C., Machado M.A., Madeira A.M.B.N., Martinez-Rossi N.M., Martins E.C., Meidanis J., Menck C.F.M., Miyaki C.Y., Moon D.H., Moreira L.M., Novo M.T.M., Okura V.K., Oliveira M.C., Oliveira V.R., Pereira H.A., Rossi A., Sena J.A.D., Silva C., de Souza R.F., Spinola L.A.F., Takita M.A., Tamura R.E., Teixeira E.C., Tezza R.I.D., Trindade dos Santos M., Truffi D., Tsai S.M., White F.F., Setubal J.C., Kitajima J.P. Nature 417:459-463(2002) [PubMed: 12024217] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33913 / NCPPB 528 / LMG 568.

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Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE008922 Genomic DNA. Translation: AAM43336.1.
RefSeq	NP_639454.1. NC_003902.1.
3D structure databases
HSSP	HSSP built from PDB template 1TUX based on UniProtKB P23360.
ProteinModelPortal	Q8P3F6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1000982.
GenomeReviews	Gene locus XCC4115 in contig AE008922_GR.
KEGG	xcc:XCC4115.
PATRIC	24079464. VBIXanCam115730_4408.
Phylogenomic databases
HOGENOM	HBG626574.
OMA	MITELDV.
ProtClustDB	CLSK813220.
Enzyme and pathway databases
BioCyc	XCAM190485:XCC4115-MONOMER.
Family and domain databases
InterPro	IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01181.
Pfam	PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00591. GLYCOSYL_HYDROL_F10. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8P3F6_XANCP

Accession

Primary (citable) accession number: Q8P3F6

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2002
Last sequence update:	October 1, 2002
Last modified:	December 14, 2011
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)