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Q8NW39

- ISDH_STAAW

UniProt

Q8NW39 - ISDH_STAAW

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Protein

Iron-regulated surface determinant protein H

Gene
isdH, harA, sasI, MW1674
Organism
Staphylococcus aureus (strain MW2)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

Binds human plasma haptoglobin-hemoglobin complexes, haptoglobin and hemoglobin. Binds haptoglobin-hemoglobin complexes with significantly higher affinity than haptoglobin alone By similarity.

Enzyme and pathway databases

BioCyciSAUR196620:GJ9Z-1696-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Iron-regulated surface determinant protein H
Alternative name(s):
Haptoglobin receptor A
Staphylococcus aureus surface protein I
Gene namesi
Name:isdH
Synonyms:harA, sasI
Ordered Locus Names:MW1674
OrganismiStaphylococcus aureus (strain MW2)
Taxonomic identifieri196620 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
ProteomesiUP000000418: Chromosome

Subcellular locationi

Secretedcell wall; Peptidoglycan-anchor Reviewed prediction

GO - Cellular componenti

  1. cell wall Source: UniProtKB-SubCell
  2. extracellular region Source: UniProtKB-KW
  3. membrane Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

Cell wall, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4040 Reviewed predictionAdd
BLAST
Chaini41 – 864824Iron-regulated surface determinant protein HPRO_0000285189Add
BLAST
Propeptidei865 – 89531Removed by sortase Reviewed predictionPRO_0000285190Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei864 – 8641Pentaglycyl murein peptidoglycan amidated threonine Reviewed prediction

Keywords - PTMi

Peptidoglycan-anchor

Interactioni

Protein-protein interaction databases

STRINGi196620.MW1674.

Structurei

Secondary structure

1
895
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi90 – 934
Helixi97 – 993
Beta strandi109 – 1124
Beta strandi114 – 1174
Helixi125 – 1306
Beta strandi133 – 1386
Beta strandi144 – 1518
Turni153 – 1553
Beta strandi156 – 16712
Beta strandi171 – 1755
Turni178 – 1803
Beta strandi183 – 1897
Beta strandi195 – 20410
Beta strandi209 – 2124
Beta strandi216 – 2216
Turni326 – 3283
Helixi330 – 3334
Turni337 – 3393
Beta strandi347 – 3526
Beta strandi354 – 3574
Beta strandi361 – 3633
Helixi365 – 3695
Beta strandi373 – 3808
Beta strandi383 – 39210
Turni393 – 3953
Beta strandi396 – 4038
Beta strandi411 – 4166
Turni417 – 4204
Beta strandi421 – 4277
Beta strandi434 – 44310
Turni444 – 4463
Beta strandi447 – 46014
Helixi472 – 48615
Helixi490 – 50314
Helixi506 – 52924

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2LHRNMR-A467-543[»]
3SZKX-ray3.01C/F86-229[»]
4FC3X-ray2.26E321-464[»]
ProteinModelPortaliQ8NW39.
SMRiQ8NW39. Positions 86-229, 326-467, 542-657.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini105 – 232128NEAT 1Add
BLAST
Domaini345 – 471127NEAT 2Add
BLAST
Domaini543 – 660118NEAT 3Add
BLAST

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi861 – 8655LPXTG sorting signal Reviewed prediction

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi698 – 77982Asp-richAdd
BLAST

Domaini

The NEAT 1 domain binds with higher affinity than the NEAT 2 domain haptoglobin-hemoglobin complexes, haptoglobin and hemoglobin By similarity.

Sequence similaritiesi

Belongs to the IsdH family.
Contains 3 NEAT domains.

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

eggNOGiNOG12793.
HOGENOMiHOG000280077.
OMAiVQTGQED.
OrthoDBiEOG6RNQ8T.

Family and domain databases

InterProiIPR019930. Haptoglobin-bd_HarA.
IPR019931. LPXTG_anchor.
IPR006635. NEAT_dom.
IPR005877. YSIRK_signal_dom.
[Graphical view]
PfamiPF05031. NEAT. 3 hits.
PF04650. YSIRK_signal. 1 hit.
[Graphical view]
SMARTiSM00725. NEAT. 3 hits.
[Graphical view]
TIGRFAMsiTIGR03658. IsdH_HarA. 1 hit.
TIGR01167. LPXTG_anchor. 1 hit.
TIGR01168. YSIRK_signal. 1 hit.
PROSITEiPS50978. NEAT. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8NW39-1 [UniParc]FASTAAdd to Basket

« Hide

MNKHHPKLRS FYSIRKSILG VASVIVSTLF LITSQHQAQA AENTNTSDKI    50
SENQNNNATT TQPPKDTNQT QPATQPANTA KTYPAADESL KDAIKDPALE 100
NKEHDIGPRE QVNFQLLDKN NETQYYHFFS IKDPADVYYT KKKAEVELDI 150
NTASTWKKFE VYENNQKLPV RLVSYSPVPE DHAYIRFPVS DGTQELKIVS 200
STQIDDGEET NYDYTKLVFA KPIYNDPSLV KSDTNDAVVT NDQSSSDASN 250
QTNTNTSNQN TSTINNANNQ PQATTNMSQP AQPKSSANAD QASSQPAHET 300
NSNGNTNDKT NESSNQSDVN QQYPPADESL QDAIKNPAII DKEHTADNWR 350
PIDFQMKNDK GERQFYHYAS TVEPATVIFT KTGPIIELGL KTASTWKKFE 400
VYEGDKKLPV ELVSYDSDKD YAYIRFPVSN GTREVKIVSS IEYGENIHED 450
YDYTLMVFAQ PITNNPDDYV DEETYNLQKL LAPYHKAKTL ERQVYELEKL 500
QEKLPEKYKA EYKKKLDQTR VELADQVKSA VTEFENVTPT NDQLTDVQEA 550
HFVVFESEEN SESVMDGFVE HPFYTATLNG QKYVVMKTKD DSYWKDLIVE 600
GKRVTTVSKD PKNNSRTLIF PYIPDKAVYN AIVKVVVANI GYEGQYHVRI 650
INQDINTKDD DTSQNNTSEP LNVQTGQEGK VADTDVAENS STATNPKDAS 700
DKADVIEPDS DVVKDADNNI DKDVQHDVDH LSDMSDNNHF DKYDLKEMDT 750
QIAKDTDRNV DKGADNSVGM SSNVDTDKDS NKNKDKVIQL NHIADKNNHN 800
GKAAKLDVVK QNYNNTDKVT DKKTTEHLPS DIHKTVDKTV KTKEKAGTPS 850
KENKLSQSKM LPKTGETTSS QSWWGLYALL GMLALFIPKF RKESK 895
Length:895
Mass (Da):100,847
Last modified:October 1, 2002 - v1
Checksum:i797BB0D67F9A0559
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000033 Genomic DNA. Translation: BAB95538.1.
RefSeqiNP_646490.1. NC_003923.1.

Genome annotation databases

EnsemblBacteriaiBAB95538; BAB95538; BAB95538.
GeneIDi1003785.
KEGGisam:MW1674.
PATRICi19569962. VBIStaAur44266_1742.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000033 Genomic DNA. Translation: BAB95538.1 .
RefSeqi NP_646490.1. NC_003923.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2LHR NMR - A 467-543 [» ]
3SZK X-ray 3.01 C/F 86-229 [» ]
4FC3 X-ray 2.26 E 321-464 [» ]
ProteinModelPortali Q8NW39.
SMRi Q8NW39. Positions 86-229, 326-467, 542-657.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 196620.MW1674.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAB95538 ; BAB95538 ; BAB95538 .
GeneIDi 1003785.
KEGGi sam:MW1674.
PATRICi 19569962. VBIStaAur44266_1742.

Phylogenomic databases

eggNOGi NOG12793.
HOGENOMi HOG000280077.
OMAi VQTGQED.
OrthoDBi EOG6RNQ8T.

Enzyme and pathway databases

BioCyci SAUR196620:GJ9Z-1696-MONOMER.

Family and domain databases

InterProi IPR019930. Haptoglobin-bd_HarA.
IPR019931. LPXTG_anchor.
IPR006635. NEAT_dom.
IPR005877. YSIRK_signal_dom.
[Graphical view ]
Pfami PF05031. NEAT. 3 hits.
PF04650. YSIRK_signal. 1 hit.
[Graphical view ]
SMARTi SM00725. NEAT. 3 hits.
[Graphical view ]
TIGRFAMsi TIGR03658. IsdH_HarA. 1 hit.
TIGR01167. LPXTG_anchor. 1 hit.
TIGR01168. YSIRK_signal. 1 hit.
PROSITEi PS50978. NEAT. 3 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MW2.

Entry informationi

Entry nameiISDH_STAAW
AccessioniPrimary (citable) accession number: Q8NW39
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 2007
Last sequence update: October 1, 2002
Last modified: September 3, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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