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Protein
Submitted name:

Transcriptional regulator

Gene

Cgl2612

Organism
Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Enzyme and pathway databases

BioCyciCGLU1204414-WGS:GSME-2522-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulatorImported
Gene namesi
Ordered Locus Names:Cgl2612Imported
OrganismiCorynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)Imported
Taxonomic identifieri196627 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesCorynebacteriaceaeCorynebacterium
Proteomesi
  • UP000000582 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi196627.cg2894.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2YVEX-ray1.40A/B1-177[»]
2YVHX-ray2.50A/B/C/D1-177[»]
2ZOYX-ray1.90A/B1-177[»]
2ZOZX-ray1.95A/B1-175[»]
ProteinModelPortaliQ8NMG3.
SMRiQ8NMG3. Positions 1-175.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini3 – 6361HTH tetR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains HTH tetR-type DNA-binding domain.SAAS annotation

Phylogenomic databases

HOGENOMiHOG000239357.
OMAiYHFPTRH.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8NMG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTSKKEMIL RTAIDYIGEY SLETLSYDSL AEATGLSKSG LIYHFPSRHA
60 70 80 90 100
LLLGMHELLA DDWDKELRDI TRDPEDPLER LRAVVVTLAE NVSRPELLLL
110 120 130 140 150
IDAPSHPDFL NAWRTVNHQW IPDTDDLEND AHKRAVYLVQ LAADGLFVHD
160 170
YIHDDVLSKS KRQAMLETIL ELIPSQT
Length:177
Mass (Da):20,259
Last modified:October 1, 2002 - v1
Checksum:iCD28ACAF96C72676
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000036 Genomic DNA. Translation: BAC00006.1.
RefSeqiNP_601813.2. NC_003450.3.
WP_011015249.1. NC_006958.1.

Genome annotation databases

EnsemblBacteriaiBAC00006; BAC00006; BAC00006.
GeneIDi1020559.
KEGGicgl:NCgl2523.
PATRICi21497270. VBICorGlu203724_2548.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000036 Genomic DNA. Translation: BAC00006.1.
RefSeqiNP_601813.2. NC_003450.3.
WP_011015249.1. NC_006958.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2YVEX-ray1.40A/B1-177[»]
2YVHX-ray2.50A/B/C/D1-177[»]
2ZOYX-ray1.90A/B1-177[»]
2ZOZX-ray1.95A/B1-175[»]
ProteinModelPortaliQ8NMG3.
SMRiQ8NMG3. Positions 1-175.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi196627.cg2894.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC00006; BAC00006; BAC00006.
GeneIDi1020559.
KEGGicgl:NCgl2523.
PATRICi21497270. VBICorGlu203724_2548.

Phylogenomic databases

HOGENOMiHOG000239357.
OMAiYHFPTRH.

Enzyme and pathway databases

BioCyciCGLU1204414-WGS:GSME-2522-MONOMER.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8NMG3_CORGL
AccessioniPrimary (citable) accession number: Q8NMG3
Secondary accession number(s): Q6M2M6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: September 7, 2016
This is version 113 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.